Rnaindel

Fix on coding gene annotations.

v.3.3.3
Update bad_lines handling.

v.3.3.2
Enables outlier analysis model with user's sklearn verison.

v.3.3.1
sklearn version pinned in Docker.
SetUp subcmd added (meaningful for PyPI version)

Improved softclip realignment.

Resolve incompatibility with newer pandas version.

Supported for compressed format (.gz) in the occurrence count annotation feature.

What's Changed
* Fix CWL bug


**Full Changelog**: https://github.com/stjude/RNAIndel/compare/v.3.2.1...v3.2.2

Support cross-platform check with T/N DNA-Seq.

v.3.2.1
Support cross-platform check with T/N DNA-Seq.