I'm not smart and introduced a silly bug in v0.30. Hotfix for that.
0.251
Older release; purpose of code availability for Nature Medicine manuscript
"Somatic expansions link alleleic structures and DNA repair gene variants as cis- and trans-acting modifiers of age of onset in Huntington disease" Nature Medicine, Ciosi et al, 2018.
0.31
Implemented variant calling in flanking amplicon sequence. Full changelog is available at http://scalehd.readthedocs.io/en/latest/VersionChangelog.html