This is the initial release of `scbs`, including all the features described in our bioRxiv preprint.
The following commands are available in this release:
- `scbs prepare`: Collect and store sc-methylation data for quick access
- `scbs filter`: Filter low-quality cells based on coverage and mean methylation
- `scbs smooth`: Smooth the pseudobulk of single cell methylation data
- `scbs scan`: Scan the genome to discover regions with variable methylation
- `scbs matrix`: Make a methylation matrix, similar to a count matrix in scRNA-seq
- `scbs profile`: Plot mean methylation around a group of genomic features