Scipion-em

users:
- fixes numpy dependency conflict PyWavelets for python3.6-> scipy <= 1.8.3

users:
- fixes numpy dependency conflict PyWavelets -> scipy 1.9 --> numpy > pyworkflow numpy.

users:
- "assign ctf" protocol now accepts SetOfParticles too.
- "subset" protocol accepts now a range of ids.
- FIX:import atomic structures now works also when files are named the same but in different folders.
developers:
- New model class: SetOfPrincipalComponents(SetOfNormalModes)
- New base wizard: VariableWizard - Wizard base where input and output paramNames can be modified and added, so
one wizard can be used in several protocols with parameters of different names.
- SelectChainWizard replaces GetStructureChainsWizard and uses VariableWizard
- SelectResidueWizard added: To select a residue
- SelectAttributeWizard added: Wizard to select attributes stored in a scipion object or set

users:
- Updating protocol box size related parameters. Now for sanity reasons, it outputs only even numbers.

users:
- Fixing an error calculating the FSC resolution value.
- FSC plots legend shows "resolution" ;-)
- Align movies protocols: possible outputs for even odd mics defined
- Import volume: fix downloading some old EMD id not numeric
- Hdf files can be open from the file browser
- Adding the protocol "box size related parameters" to estimate the different parameters needed for various pickers.

developers:
- New method at pwem/convert/headers.setMRCSamplingRate: sets the sampling rate of an mrc file. Image Object has it: volume.setMRCSamplingRate(3.5) should work.
- protcols.conf minimized only containig its own protocols
- Variable wizard with customizable target, input and output parameters

users:
- New viewer: ChimeraAttributeViewer: analyze scalar attributes of the residues or atoms in a structure
- Local resolution viewers use now native ChimeraX key
- Adding the protocol "Manual check point" that kept running for a time determined by a parameter or until
the user determines it is convenient.
- Calculating the FSC resolution value and displaying it in the viewer.