Sfftk

Latest version: v0.10.3

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0.7.2

* fixes for Github workflow
* removal of mock packages which prevented documentation build
* requirements.txt for building documentation
* remove all appearances of `from __future__ import <foo>`
* remove most uses of python2-3 adaption functions
* inclusion of missing image file to run test
* now including explicit rtd configs (`.readthedocs.yml`)
* added numpy as explicit dependency
* removed source dependency for ahds

0.7.1

* temporary file should exclude geometry: FIXED

0.7.0

* `sff view --transform file.map` now outputs the image-to-physical space transform; `sff view file.map` will still
output
* user may choose how to display the transform
using `sff view --transform [--print-array (default) | --print-csv | --print-ssv] file.map`
* `sff convert` now takes an option `--image` that takes an `.map/.mrc/.rec` file and extracts the transform to set as
transform `0` ; excluding `--image <file.map>` produces a warning and possibly wrong transform `0`
* `sff notes [add|edit|del] [-x/--transform-id <int>] [-X/--transform <12-floats>] file.sff` to add/modify/delete
transforms
* `sff notes show -H file.sff` now displays the table of transforms
* all formats now honour `--image <file.map>` to set the correct transform
* `sfftk.readers.mapreader.compute_transform('file.map')` computes transform; when computing the transform from MAP
file, only reads the header
* all associated tests
* correct spelling for ångström
* minor cleanup and improvements
* bugfixes for cases not caught by tests e.g. merge annotation does not interact with transform_list - must be done
manually
* for map file we will not write skew and translation matrices; assume rectilinear lattices
* bugfix: `sff notes add` was always adding extra software
* bugfix: display of transforms when empty
* tests for edit and del of notes: OK
* incomplete updates to documentation
* including image used for testing transforms

0.6.1.dev0

* improvements for reading SuRVoS files with additional attributes

0.6.0.dev2

Cleanup

* removed all u"..." strings and other Python2 related code
* run flake8 checks; considerable reformatting

0.6.0.dev1

Bugfixes

* removed .travis.yml since we don't use them anymore
* added ilastik.IlastikHeader class, which was implied but absent >:(
* fixed github workflow by removing py27 and py35 and quote py3.10

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