Simsi-transfer

- Fixed metafile handling with multiple reporter ion files again

- Fixed metafile handling with multiple reporter ion files

- Support for TMT-Pro and other isobaric labels
- Added TMT correction factor files to meta file input

- Added support for a meta file with multiple raw and MQ input folders
- Updated ThermoRawFileParser to v1.4.0, fixes wrong MS3->MS2 assignment issue
- Added support for majority vote for PTM-ambiguous clusters
- Added calculation of average phospho-probability string
- Added support for keeping the decoy hits from the MQ output (enabled by default)

- Updated MaRaCluster to v1.02

- Improved handling of missing columns in evidence.txt and msms.txt input files
- Improved logging
- Added greeter and README badges