Snk

Latest version: v0.31.0

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0.22.2

✨added `additional_snakemake_args` to snk config: A list of additional arguments to pass to snakemake.

**Full Changelog**: https://github.com/Wytamma/snk/compare/v0.22.1...v0.22.2

0.22.1

- Improve `snk list` cli
- Minor updates

**Full Changelog**: https://github.com/Wytamma/snk/compare/v0.22.0...v0.22.1

0.22.0

✨Create conda envs in parallel
A snakemake workflow that uses a lot of conda envs can take a long time to install as each env is created sequentially. Now running `<workflow-name> env create` will create all the conda envs in parallel (up to `--workers` at a time, defaults to number of cores). Single envs can be create with `<workflow-name> env create <env-name>`.

✨List commands now return tables
Running `<workflow-name> env list`/`<workflow-name> profile list`/`<workflow-name> script list` will now return a rich table.
<img width="556" alt="Screenshot 2024-01-30 at 2 24 31 pm" src="https://github.com/Wytamma/snk/assets/13726005/4d3ef19b-bf47-49e6-b4fa-02a7adebf77b">

✅ Improved testing
Better testing of environment commands.

**Full Changelog**: https://github.com/Wytamma/snk/compare/v0.21.2...v0.22.0

0.21.2

Minor updates and fixes

**Full Changelog**: https://github.com/Wytamma/snk/compare/v0.21.1...v0.21.2

0.21.1

🐛 fix bug in environment subcommand
⬆️ Bump snakemake to < 8

**Full Changelog**: https://github.com/Wytamma/snk/compare/v0.21.0...v0.21.1

0.21.0

What's Changed
* :truck: rename pipeline to workflow by Wytamma in https://github.com/Wytamma/snk/pull/61
* [💥 remove 3.7 support](https://github.com/Wytamma/snk/commit/03de3d51a72e344ff99ef2d1135cd2a637795624)
* [✨ add validate function](https://github.com/Wytamma/snk/commit/f4bd1904f319b00da85c3aa0d2dc0d8ff1622667)


**Full Changelog**: https://github.com/Wytamma/snk/compare/v0.20.1...v0.21.0

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