Solaris

Added
- 20200803, jshermeyer: Added mAP metric
- 20200701, dphogan: Added SpaceNet Change and Object Tracking (SCOT) metric
Removed
Changed
Fixed
Deprecated
Security

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Added
- 20200701, dphogan: Added multimodal preprocessing subpackage (360)
- 20200716, dphogan: Added three-part tutorial for preprocessing subpackage
Fixed
- 20200630, dphogan: Remove edge case numeric values from loss function tests (358)
- 20200706, dphogan: Added API reference entry for utils.data
- 20200706, roshanr11: fixed `checkpoint_frequency` parameter in YAML files to work as intended
- 20200706, roshanr11: tqdm progress bar fixed, follow-up on previous issue (335)

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Changed
- 20200401, rbavery: new tiler method `fill_all_nodata` to fill nodata with `"mean"` or custom value (328)
- 20200401, rbavery: option to ignore MultiPolygon and GeometryCollection types in `geojson2coco` since these cannot be converted to COCO.
- 20200401, rbavery: new function `solaris.vector.mask.geojsons_to_masks_and_fill_nodata`, which rasterized vector labels according to raster tile extents. Fills nodata areas in raster tile and corresponding rasterized label raster.
- 20200401, rbavery: new test/example of tiling and creating instance masks with nodata values filled in tile outputs

Fixed
- 20200401, rbavery: restrict_to_aoi implemented, sets values outside aoi to nodata value (327, 240)
- 20200401, rbavery: tqdm prints correctly in notebook and lab (if ipywidgets is enabled according to https://github.com/tqdm/tqdm/issues/394issuecomment-384743637) (335)
- 20200401, rbavery: fixed bug where aoi boundary was not intersected with src_img extent prior to tiling
- 20200401, rbavery/nrweir: adapted `_check_crs` to convert `pyproj.CRS` or pass through `rasterio.crs.CRS` class when rasterio crs object is required (for example, reprojecting in the tilers)
- 20200414, zaburo-ch: fixed `val_datagen` to point to the correct augmentation pipeline

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Changed
- 20200103, nrweir: Updated version pins for proj6 compatibility, also relaxed version pins for many dependencies (321)
Fixed
- 20200103, nrweir: Fixed various places where CRS wasn't passed correctly from rasterio CRS object (319, 322)
- 20200103, nrweir: Fixed axis length check for axis ordering in sol.utils.raster.reorder_axes() (318)

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Added
- 20190930, nrweir: Added CHANGELOG.md (259)
- 20190930, nrweir: Add contributing guidelines, CONTRIBUTING.md (260)
- 20191003, nrweir: Added `solaris.vector.mask.instance_mask()` (261)
- 20191009, nrweir: Added `solaris.data.coco` and some label utility functions (265)
- 20191009, nrweir: Added `solaris.data.coco` API documentation and a usage tutorial (266)
- 20191122, dphogan: Added option to take sigmoid of input in TorchDiceLoss (281)
- 20191122, dphogan: Inferer calls now take default DataFrame path from config dictionary (282)
- 20191125, nrweir: Added `solaris.utils.data.make_dataset_csv()` (241)
- 20191202, dphogan: Added fixed nodata value of 0 for mask files (295)
- 20191203: dphogan: Added filename argument to vector tiler's tile() (297)
- 20191211: rbavery: Tilers also accept rasterio CRS objects, `RasterTiler.tile` returns CRS object for vector tiler (294)
- 20191214: rbavery: tiler argument `aoi_bounds` is now `aoi_boundary` and can accept polygons besides boxes. functionaility for this moved to `solaris.utils.geo.split_geom` (298)
- 20191217: dphogan: Added support for custom loss functions (308)

Fixed
- 20191123, dphogan: Fixed issue in mask_to_poly_geojson() with empty GeoDataFrames.
- 20191204, dphogan: Fixed issue with file output from footprint_mask() and contact_mask() (301)
- 20191212, jshermeyer: Fixed issue with vector tiling: could not load in list of sublists previously. Corrected comments for appropriate order as well. (306)
- 20191219: rbavery: In `solaris.utils.geo.split_geom`, tile bounds that fall within `aoi_boundary` but not `src_img` are not returned. `solaris.vector.mask.instance_mask` only rasterizes geojsons where `reference_im` has values (nodata pixels won't have corresponding labels) (315)


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_The changelog for solaris was not implemented until after version 0.1.3, therefore no previous changes are recorded here. See the [GitHub releases](https://github.com/CosmiQ/solaris/releases) for available change records._