Straxen

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* Collect SOM dtype at one place by dachengx in https://github.com/XENONnT/straxen/pull/1511
* Stop support for list of "take" protocol by dachengx in https://github.com/XENONnT/straxen/pull/1517
* Add `stage` flag for `RucioRemoteBackend` by dachengx in https://github.com/XENONnT/straxen/pull/1520

**Full Changelog**: https://github.com/XENONnT/straxen/compare/v3.0.1...v3.0.2

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* Fix run_doc for led plugin by GiovanniVolta in https://github.com/XENONnT/straxen/pull/1462
* Check RSE in `_find` method of `RucioRemoteFrontend` by dachengx in https://github.com/XENONnT/straxen/pull/1464
* Garbage collection after calculated each chunk in `peak_positions_mlp` by dachengx in https://github.com/XENONnT/straxen/pull/1467
* Enforce stable sorting in `np.sort` and `np.argsort` by dachengx in https://github.com/XENONnT/straxen/pull/1468
* Clean `deprecate_kwarg` by dachengx in https://github.com/XENONnT/straxen/pull/1470
* Update strax version to v2.0.1 by dachengx in https://github.com/XENONnT/straxen/pull/1473
* Remove expedients plugins because SOM will be default by dachengx in https://github.com/XENONnT/straxen/pull/1472
* Remove 1T related codes by dachengx in https://github.com/XENONnT/straxen/pull/1476
* Use SOM peaklets classification by default by dachengx in https://github.com/XENONnT/straxen/pull/1471
* Fix theta uncertainty bug by napoliion in https://github.com/XENONnT/straxen/pull/1466
* Remove URLConfig warning about sorting by dachengx in https://github.com/XENONnT/straxen/pull/1477
* Merge branch 'sr1_leftovers' into master by dachengx in https://github.com/XENONnT/straxen/pull/1478
* Fix small bug in CNF by dachengx in https://github.com/XENONnT/straxen/pull/1479
* Remove GCN & CNN S2 pos-rec by dachengx in https://github.com/XENONnT/straxen/pull/1484
* Set CNF as the default S2 (x, y) position-reconstruction by dachengx in https://github.com/XENONnT/straxen/pull/1486
* Prototype of peaklets-level (x, y) S2 position reconstruction by dachengx in https://github.com/XENONnT/straxen/pull/1482
* Rename old `PeakletClassification` as `PeakletClassificationVanilla` by dachengx in https://github.com/XENONnT/straxen/pull/1487
* Remove Bayes models by dachengx in https://github.com/XENONnT/straxen/pull/1488
* Rename `defualt_run_comments` -> `default_run_comments` by dachengx in https://github.com/XENONnT/straxen/pull/1489
* Accelerate Euclidean distance by numba by dachengx in https://github.com/XENONnT/straxen/pull/1493
* Move `set_nan_defaults` to be a stand-alone function by dachengx in https://github.com/XENONnT/straxen/pull/1497
* Set CNF as the default S2 (x, y) position-reconstruction by dachengx in https://github.com/XENONnT/straxen/pull/1494
* Back to fixed window in LED calibration by GiovanniVolta in https://github.com/XENONnT/straxen/pull/1499
* Move `compute_center_times` from straxen to strax by dachengx in https://github.com/XENONnT/straxen/pull/1501
* Use numpy and strax native dtypes, not `"<i8"` or `"<f4"` by dachengx in https://github.com/XENONnT/straxen/pull/1502
* Inherit `area_fraction_top`, `center_time` and `median_time` from peaklets by dachengx in https://github.com/XENONnT/straxen/pull/1503
* Bump version of changed plugins in 1503 by dachengx in https://github.com/XENONnT/straxen/pull/1504
* Clean unnecessary codes by dachengx in https://github.com/XENONnT/straxen/pull/1507
* Clean chunk after computing `records` by dachengx in https://github.com/XENONnT/straxen/pull/1508
* Add a line of comment about memory optimization by dachengx in https://github.com/XENONnT/straxen/pull/1509

New Contributors
* napoliion made their first contribution in https://github.com/XENONnT/straxen/pull/1466

**Full Changelog**: https://github.com/XENONnT/straxen/compare/v3.0.0...v3.0.1

-------------------
* Inherit `DEFAULT_CHUNK_SPLIT_NS` from strax by dachengx in https://github.com/XENONnT/straxen/pull/1405
* Use `pyproject.toml` to install straxen by dachengx in https://github.com/XENONnT/straxen/pull/1408
* Be compatible with new `Plugin.run_id` by dachengx in https://github.com/XENONnT/straxen/pull/1410
* Small restrax fix - DAQ by cfuselli in https://github.com/XENONnT/straxen/pull/1402
* Make targeted `raw_records` chunk 500MB by dachengx in https://github.com/XENONnT/straxen/pull/1412
* Bump actions/setup-python from 5.1.0 to 5.1.1 by dependabot in https://github.com/XENONnT/straxen/pull/1403
* fix peak per event plugin by RoiFrankel in https://github.com/XENONnT/straxen/pull/1400
* Dynamic led window by tflehmke in https://github.com/XENONnT/straxen/pull/1401
* Plugins for position reconstruction with conditional normalizing flow by juehang in https://github.com/XENONnT/straxen/pull/1404
* Remove redundant spaces by dachengx in https://github.com/XENONnT/straxen/pull/1411
* Stop using `self.config` because we do not use `strax.Option` by dachengx in https://github.com/XENONnT/straxen/pull/1413
* Remove `DetectorSynchronization` by dachengx in https://github.com/XENONnT/straxen/pull/1414
* Remove configuration `sum_waveform_top_array` from `MergedS2s` by dachengx in https://github.com/XENONnT/straxen/pull/1415
* Debug for `EventwBayesClass` because peaks overlapping by dachengx in https://github.com/XENONnT/straxen/pull/1417
* Refactor nv plugins by WenzDaniel in https://github.com/XENONnT/straxen/pull/1228
* Changed NV software trigger by WenzDaniel in https://github.com/XENONnT/straxen/pull/1388
* Assign `__version__` of `RecordsFromPax` by dachengx in https://github.com/XENONnT/straxen/pull/1418
* Minor debug for the `pyproject.toml` by dachengx in https://github.com/XENONnT/straxen/pull/1420
* Fix the usage of scripts by dachengx in https://github.com/XENONnT/straxen/pull/1423
* Deprecate selection_str by dachengx in https://github.com/XENONnT/straxen/pull/1424
* Fix singleton pattern for `MongoDownloader` by dachengx in https://github.com/XENONnT/straxen/pull/1426
* Use more `strax.RUN_METADATA_PATTERN` by dachengx in https://github.com/XENONnT/straxen/pull/1432
* Be compatible with utilix>0.9 by dachengx in https://github.com/XENONnT/straxen/pull/1433
* Specify available RSE in `RucioRemoteBackend` by dachengx in https://github.com/XENONnT/straxen/pull/1435
* Add docstring rucio by yuema137 in https://github.com/XENONnT/straxen/pull/1436
* `pymongo_collection` is a bit confusing by dachengx in https://github.com/XENONnT/straxen/pull/1437
* Put the RunDB API interface and MongoDB interface together by yuema137 in https://github.com/XENONnT/straxen/pull/1442
* change N_chunk to URLConfig in peak_positions_cnf by juehang in https://github.com/XENONnT/straxen/pull/1443
* Bump actions/setup-python from 5.1.1 to 5.2.0 by dependabot in https://github.com/XENONnT/straxen/pull/1419
* Fixed default window position by tflehmke in https://github.com/XENONnT/straxen/pull/1429
* Add `data_start` to temporary dtype for `events_nv` by dachengx in https://github.com/XENONnT/straxen/pull/1447
* Add level in the tree when drawing dependency tree by dachengx in https://github.com/XENONnT/straxen/pull/1446
* Move the whole mongo_storage module to utilix by yuema137 in https://github.com/XENONnT/straxen/pull/1445
* Following the breaking change of https://github.com/AxFoundation/strax/pull/910 by dachengx in https://github.com/XENONnT/straxen/pull/1452
* Switch to master for docformatter by yuema137 in https://github.com/XENONnT/straxen/pull/1453
* Adjust saving preference by yuema137 in https://github.com/XENONnT/straxen/pull/1451
* Save first samples of peak(lets) waveform by HenningSE in https://github.com/XENONnT/straxen/pull/1406
* Only use `ThreadedMailboxProcessor` when `allow_multiprocess=True` by dachengx in https://github.com/XENONnT/straxen/pull/1455
* Remove redundant pos recon by yuema137 in https://github.com/XENONnT/straxen/pull/1449
* Clean `DeprecationWarning` and simplify plugins by dachengx in https://github.com/XENONnT/straxen/pull/1456
* Update dependencies of strax, remove git repo from dependency list by dachengx in https://github.com/XENONnT/straxen/pull/1458
* Add fix integration window for the noise runs by GiovanniVolta in https://github.com/XENONnT/straxen/pull/1457
* Use `max_time` when calculating peaklets properties by dachengx in https://github.com/XENONnT/straxen/pull/1459

New Contributors
* RoiFrankel made their first contribution in https://github.com/XENONnT/straxen/pull/1400
* tflehmke made their first contribution in https://github.com/XENONnT/straxen/pull/1401
* juehang made their first contribution in https://github.com/XENONnT/straxen/pull/1404
* HenningSE made their first contribution in https://github.com/XENONnT/straxen/pull/1406

**Full Changelog**: https://github.com/XENONnT/straxen/compare/v2.2.5...v3.0.0

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* Generate only one instance for `MongoDownloader` by dachengx in https://github.com/XENONnT/straxen/pull/1398
* Load whole run for `VetoIntervals` regardless the run length by dachengx in https://github.com/XENONnT/straxen/pull/1399

**Full Changelog**: https://github.com/XENONnT/straxen/compare/v2.2.4...v2.2.5

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* Parse USERDISK base on hostname in RunDB by dachengx in https://github.com/XENONnT/straxen/pull/1384
* Fix packages temporarily for documentation generation by dachengx in https://github.com/XENONnT/straxen/pull/1385
* Bad url warnings by LuisSanchez25 in https://github.com/XENONnT/straxen/pull/1216
* Allow local blinding files by WenzDaniel in https://github.com/XENONnT/straxen/pull/1387
* Lock strax version in test by dachengx in https://github.com/XENONnT/straxen/pull/1389
* Add xedocs version to context config, only if xedocs is called by Ananthu-Ravindran in https://github.com/XENONnT/straxen/pull/1393
* Revert "Lock strax version in test" by dachengx in https://github.com/XENONnT/straxen/pull/1394

New Contributors
* Ananthu-Ravindran made their first contribution in https://github.com/XENONnT/straxen/pull/1393

**Full Changelog**: https://github.com/XENONnT/straxen/compare/v2.2.3...v2.2.4

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* No need to set `loop_over` for `EventBasics` by dachengx in https://github.com/XENONnT/straxen/pull/1377
* Initialize plugins whose `depends_on` is property by dachengx in https://github.com/XENONnT/straxen/pull/1379
* Collect functions used for documentation building in `docs_utils.py` by dachengx in https://github.com/XENONnT/straxen/pull/1380

**Full Changelog**: https://github.com/XENONnT/straxen/compare/v2.2.2...v2.2.3