Tapqir

Latest version: v1.1.19

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1.1.7

What's Changed
* Save rastergram by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/365
* save ttfb fit data by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/366
* GUI for number of spot states by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/367
* Bug fixes by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/368
* torch version >=1.11.0


**Full Changelog**: https://github.com/gelles-brandeis/tapqir/compare/v1.1.6...v1.1.7

1.1.6

What's Changed
* Clarify `theta_probs` description by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/360
* Multi state HMM by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/357
* Post analysis GUI by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/361
* Binary rastergram option in `ttfb` command by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/362
* z_sample method by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/363
* ttfb gui by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/364


**Full Changelog**: https://github.com/gelles-brandeis/tapqir/compare/v1.1.5...v1.1.6

1.1.5

What's Changed
* `dwelltime` command by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/356


**Full Changelog**: https://github.com/gelles-brandeis/tapqir/compare/v1.1.4...v1.1.5

1.1.4

What's Changed
* Fix cosmos+hmm by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/353
* cosmos+hmm dependencies by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/355


**Full Changelog**: https://github.com/gelles-brandeis/tapqir/compare/v1.1.3...v1.1.4

1.1.3

What's Changed
* Fix `crosstalk` model and add it to unit tests by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/341
* Fix avail models by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/342
* Update installation instructions by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/344
* Fix gui by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/345
* Fix compute_probs in hmm by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/346
* Fix `_sequential_logmatmulexp` by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/348
* Bump pyro version to 1.8.2 by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/349
* Add `subset` command by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/350
* Add `ttfb` command by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/351


**Full Changelog**: https://github.com/gelles-brandeis/tapqir/compare/v1.1.2...v1.1.3

1.1.2

Bug fix
* Fixes `KeyError` bug produced during checking the convergence criteria by ordabayevy in https://github.com/gelles-brandeis/tapqir/pull/340


**Full Changelog**: https://github.com/gelles-brandeis/tapqir/compare/v1.1.1...v1.1.2

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