Thera-py

Latest version: v0.6.0

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0.5.0dev0

What's Changed
* test: Add test for DiseaseIndicationBase by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/342
* build(deps): resolve ipython and starlette vulnerabilities by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/347
* fix: expand wikidata SPARQL query by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/353
* build: remove requirements.txt files by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/358
* style: resolve mypy errors by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/369
* cicd: update release.yml (publish python distribution to pypi) by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/367
* chore: remove unused makefile by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/372
* feat!: use vrs 2.0-alpha models in /normalize by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/364
* cicd: add python3.11 to python-version matrix by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/373
* cicd: add Ruff linting and formatting by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/376
* build: use pyproject.toml for build configuration by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/377
* style: remove unnecessary noqa: E501 by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/381
* build: fix package name in pyproject.toml by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/380


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/v0.4.0...0.5.0-dev0

0.4.0

Not secure
What's Changed
* feat: add manual data extraction override rules by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/300
* ci: resolve GH Actions warnings by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/301
* fix(rxnorm): remove NOCODE IDs by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/298
* fix: correct rules filename by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/302
* refactor!: changes to help with serverless (staging) by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/307
* fix(gtop): handle guide to pharmacology data updates by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/308
* docs: add license by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/321
* ci: initial overhaul of tests by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/317
* fix: remove script tags from gtop therapy names by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/324
* refactor: remove unused ID prefixes by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/320
* feat: use new RxNorm download method by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/319
* refactor: remove unused classes/imports by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/318
* fix: pypi package should include all files in etl/ (staging) by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/337
* build: update disease normalizer to >=0.3.1 by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/338


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/v0.4.dev0...v0.4.0

0.4.dev0

Not secure
What's Changed
* refactor: use therapeutic descriptor from gagh.vrsatile.pydantic by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/288
* refactor: thereapeutic_id --> therapeutic, disease_id --> disease by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/289


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/v0.3.6...v0.4.dev0

0.3.10

What's Changed
* fix: Add test for DiseaseIndicationBase by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/341
* build(deps): resolve ipython and starlette vulnerabilities by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/346


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/v0.3.9...0.3.10

0.3.9

Not secure
What's Changed
* fix: pypi package should include all files in etl/ by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/336
* build: update disease normalizer to ~0.2.19 by korikuzma in https://github.com/cancervariants/therapy-normalization/pull/339


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/v0.3.8...v0.3.9

0.3.8

Not secure
What's Changed
* docs: add license by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/322
* ci: overhaul test fixtures by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/326
* fix: resolve dependency and environment management issues by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/316
* fix(rxnorm): remove NOCODE id's by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/329
* feat: use new RxNorm download method by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/332
* refactor: remove unused schema elements by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/331
* ci: resolve GH Actions version warnings by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/328
* feat: add manual data extraction override rules by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/327
* fix(gtop): handle guide to pharmacology data updates by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/330
* fix: remove script tags from gtop therapy names by jsstevenson in https://github.com/cancervariants/therapy-normalization/pull/333


**Full Changelog**: https://github.com/cancervariants/therapy-normalization/compare/v0.3.7...v0.3.8

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