Adds: (29) * Tools: `alphafold`, `clustalo`, `demucs`, `diamond_blastp`, `diamond_blastx`, `rapsearch2` * Support for `is_async` for every tool * New docs links * Explicit database defaults
Modifies: (30) * Install process, simplified with `reticulate` 1.25 (30) * Min Python version -> 3.7
0.9.8
Allows previously-blocked `--max-target-seqs` argument on `diamond blastx`
0.9.1
Adds:
- Adds a `skip_decompression` tool param under `*kwargs`
Updates:
- `shogun_align` to use Bowtie 2 instead of BURST as the underlying aligner
See 134.
0.8.0
Overhauls the install process (27), which now uses Miniconda (or `pyenv`, if that fails) to install the client.
This release requires the latest version of the [`reticulate`](https://rstudio.github.io/reticulate/index.html) package, version **1.24** or greater.
Install or update `reticulate` with: r install.packages("reticulate")
Lower versions may encounter issues installing on MacOS with ARM architecture (the newest M1 chip).
If installation issues persist, please contact Toolchest and/or [file a Github issue](https://github.com/trytoolchest/toolchest-client-r/issues).
0.7.46
Modifies: - Bugfix, maintaining ordering of inputs for `megahit`