Vitessce

Patch Changes

- Added support for ome-zarr-zip files (`vitessce/constants-internal`, `vitessce/all`, `vitessce/example-configs`) ([1945](https://github.com/vitessce/vitessce/pull/1945))

- Add a config that uses a spatialBeta view and relies on auto-initialization of the coordination space. (`vitessce/example-configs`) ([1901](https://github.com/vitessce/vitessce/pull/1901))

Patch Changes

- Add more exports that are required for accessing multi-level coordination from python-defined plugin views. (`vitessce/all`) ([1942](https://github.com/vitessce/vitessce/pull/1942))

- Fix incorrect obsSets.spatialdata.zarr file definition schema. Add featureLabelsType coordination type. (`vitessce/constants-internal`, `vitessce/schemas`) ([1938](https://github.com/vitessce/vitessce/pull/1938))

Patch Changes

- Update showcase page of docs. (`docs`) ([1939](https://github.com/vitessce/vitessce/pull/1939))

- Add obsSets to tooltip for Segmetations (`vitessce/spatial-beta`) ([1936](https://github.com/vitessce/vitessce/pull/1936))

- Added help text overlay for the views (`vitessce/scatterplot-embedding`, `vitessce/scatterplot-gating`, `vitessce/statistical-plots`, `vitessce/genomic-profiles`, `vitessce/layer-controller`, `vitessce/obs-sets-manager`, `vitessce/feature-list`, `vitessce/description`, `vitessce/constants-internal`, `vitessce/heatmap`, `vitessce/spatial`, `vitessce/status`, `vitessce/vit-s`) ([1911](https://github.com/vitessce/vitessce/pull/1911))

Patch Changes

- Support anndata-as-h5ad via Zarr reference specs. (`vitessce/constants-internal`, `vitessce/zarr-utils`, `vitessce/schemas`) ([1811](https://github.com/vitessce/vitessce/pull/1811))

- Fixes the svg length error for legends in dev environment due to missing props (`vitessce/scatterplot-embedding`, `vitessce/heatmap`, `vitessce/spatial`) ([1925](https://github.com/vitessce/vitessce/pull/1925))

- Implement sequence transformation for OME-NGFF / SpatialData. (`vitessce/spatial-utils`) ([1900](https://github.com/vitessce/vitessce/pull/1900))

- Increase timeout for CCF test due to long loading time for CCF web component. (`vitessce`) ([1931](https://github.com/vitessce/vitessce/pull/1931))

- Fixes type for the constants (`vitessce/constants`, `vitessce`, `vitessce/dev`) ([1914](https://github.com/vitessce/vitessce/pull/1914))

- Support for markdown (rich text) in the description view (`vitessce/description`, `vitessce/constants-internal`, `vitessce/example-configs`) ([1924](https://github.com/vitessce/vitessce/pull/1924))

- Bump higlass version to fix css issue. (`vitessce/genomic-profiles`) ([1930](https://github.com/vitessce/vitessce/pull/1930))

Patch Changes

- Fix issue in versioned URLs. (`vitessce`) ([1917](https://github.com/vitessce/vitessce/pull/1917))

Patch Changes

- Add configs for paper figures. (`vitessce/statistical-plots`, `vitessce/sets-utils`, `vitessce/example-configs`) ([1915](https://github.com/vitessce/vitessce/pull/1915))