Wavespectra

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New Features
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* Support ERA5 and NDBC netcdf file types in `read_dataset` reader.
* Support datasets with no lat / lon variables when writing octopus and swan ascii.
There is now an option to specify the coordinates manually or skip specifying them.

Internal Changes
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* Stop relying on lon/lat coordinates in order to identify file types in read_dataset.
* Ensure octopus writer can handle lon/lat defined as coordinates in dataset rather
than data_vars.
* Fix octopus writer to support datasets without site as a dimension.
* Fix swan ascii writer for bug in cases where lon/lat are dimensions and site is not.

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New Features
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* Allow ignoring missing sites within tolerance in the `nearest` method
(`PR102 <https://github.com/wavespectra/wavespectra/pull/102>`_).

Internal Changes
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* Ensure at least one site is found in `nearest` method.
* Ensure sites are returned in the same order as the input dataset in `nearest` method
when the `unique` option is selected.

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New Features
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* Docker image based on ubuntu:22.04 built and push to github packages (`PR100 <https://github.com/wavespectra/wavespectra/pull/100>`_).

Internal Changes
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* Stop pinning netcdf4, opendap issue seems to be fixed.
* Remove numpy from pyproject.toml since numba installs specific versions (Fixes `GH95 <https://github.com/wavespectra/wavespectra/issues/95>`_)
* Move content of tox.ini into pyproject.toml.

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New Features
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* New reader `read_ww3_station`_ for WW3 stations spectral files from GFS / NOAA by
`Matthew Iannucci`_ (`PR92 <https://github.com/wavespectra/wavespectra/pull/92>`_).

Internal Changes
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* Changes to all netcdf- and zarr-based, and some ascii-based reader functions to allow
providing file objects. This allows reading from remote files without downloading
them first, e.g. from Google Cloud Storage or AWS S3 by providing a fsspec file
object. By `Matthew Iannucci`_ (`PR92 <https://github.com/wavespectra/wavespectra/pull/92>`_).
* Replace deprecated `date_parser` argument in pandas.read_csv calls by `date_format`
(`GH90 <https://github.com/wavespectra/wavespectra/issues/90>`_).

.. _`Matthew Iannucci`: https://github.com/mpiannucci
.. _`read_ww3_station`: https://github.com/wavespectra/wavespectra/blob/master/wavespectra/input/ww3_station.py

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This release adds deprecation warnings to functions and modules that will be removed or
redesigned in the next major release.

Bug Fixes
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* Fix reading of gzipped swan ascii files.

Internal Changes
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* Add deprecation warnings to prepare for the next major release.

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Internal Changes
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* Redefine packaging via pyproject.toml to conform to PEP517/518 (`PR77 <https://github.com/wavespectra/wavespectra/pull/87>`_).
* All packaging metadata removed from setup.py and moved to pyproject.toml. The
setup.py file is now only used to build the Fortran module.
* Removed the MANIFEST.in file, package data now handled in pyproject.toml.
* Removed the requirements folder, requirements now handled in pyproject.toml.
* Removed some packaging attributes from `wavespectra.__init__.py`, now handled in
pyproject.toml.
* Replace docs the RTD by the PYDATA docs theme, this fixes issue with rtd not working with sphinx>=7.0.
* Add readthedocs config.