Aiagents4pharma

[1.6.1](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.6.0...v1.6.1) (2025-01-20)


Bug Fixes

* update notebook ([b4a58e0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/b4a58e078e182eeefe6b1f50b4a6aec2d4400c6b))
* update tutorials ([cad90eb](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/cad90eb1ca45c3e6d342043fad9086d021003a0b))

[1.6.0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.5.4...v1.6.0) (2025-01-14)


Bug Fixes

* downgrade python ([5d63e8b](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/5d63e8b2715367b6a7f595b045f50711904c7efc))
* downgrade torch version ([c5d49c5](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/c5d49c5a8f12047cd26ed2a2f71d5d0756e26aef))
* drop half precision option ([b4c8eea](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/b4c8eeabc8625eae3df51504b2d6ca8087263ca1))
* drop the half precision ([101913b](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/101913b8bc0375f22cf830c19617597d7da9c25d))
* further downgrade pytorch ([f9da9f4](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/f9da9f4e99d839378c77514bba420a8cb9d4c599))
* revert back python version ([4255fb3](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/4255fb30bd9772585988dfb1f008101d208dae42))
* separate ubuntu and macos code-cov ([d4157ab](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/d4157abb7c3fd147caf18197b2e934162a73f940))
* switch to macos-13 for testing ([97a9e0b](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/97a9e0b522e757642dfc6a779a38a9603696b732))
* update pytorch version ([3d6593a](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/3d6593a998617d06e7ea133a86a8319a985c0fe4))
* update system prompt and mkdocs index page ([ca7dbf9](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/ca7dbf968487d1a4c1735538bd7069cc58366bb7))


Features

* add evaluation tutorial using textual embeddings ([c020a99](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/c020a9909f91fc8f7e1945a0cb7abb5690a06091))
* add multimodal embedding alignment tutorial ([4651bc4](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/4651bc41cb6242d5b93b33343ea8a6408458cda2))
* add protein embedding tutorial ([c3010bd](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/c3010bd4ae992a9fca96b49c9c0bba152e549b6b))
* added back the half precision option ([4cdbac4](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/4cdbac44a56d38c20c03ed511bab5a5b0504366c))
* embeddings ([589a878](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/589a87887692f1098fcc66e23d3a2ced3cdeb2b8))
* initial setup for textual embeddings ([e5498ab](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/e5498abeae42e64b24865f44fdd0f70746ac34c6))
* update pytests and docs ([4297351](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/429735104af4eb190acc76a12f8baf354510e2ae))
* update textual embeddings for starkqa-primekg ([4a3adb9](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/4a3adb95653ad8b64ebd8f5d4e7e066cf799edf6))

[1.5.4](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.5.3...v1.5.4) (2025-01-11)


Bug Fixes

* change nested quotes ([a89b741](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/a89b7413d17dfbec590182ff73df4b901f3b0e3c))

[1.5.3](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.5.2...v1.5.3) (2025-01-10)


Bug Fixes

* update docs for talk2kg ([87040a7](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/87040a71d90a9d98feabb53925525d3bcfa423bc))
* update main pyproject.toml ([5c1dec1](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/5c1dec11a68acdf0a0bce2308383c55b941c59c2))

[1.5.2](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.5.1...v1.5.2) (2025-01-10)


Bug Fixes

* modify project toml, docs and reqs ([9eb4cfb](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/9eb4cfb7a715e34c502ae6865c5fcc681a9d12c8))
* modify project toml, docs and reqs ([86c5cd0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/86c5cd019567ccda487526d48bb30274b8f9f9e5))

[1.5.1](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.5.0...v1.5.1) (2025-01-09)


Bug Fixes

* add the toml file for T2B ([9ad2b91](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/9ad2b912af5f51a91927a08405836076c6b2296a))
* update main README ([b7345d8](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/b7345d8d91bd2bd0e646e245898d07f68dee2944))
* update openai package ([af1c8e4](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/af1c8e4e8a8391f7cc8cea55b310861dd9b5cf32))
* update pull_request event to pull_request_target for T2B ([17adde2](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/17adde2e7c8b9e0f42249b32b73335223576d1b3))