Aiagents4pharma

[1.5.0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.4.3...v1.5.0) (2025-01-09)


Bug Fixes

* change file_id of dataverse ([e2f9298](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/e2f929809d2f63e996b442c4f253111d08c14c01))
* change torch version ([9bf8730](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/9bf8730bb92b85a645c833a2cc51c908e6df0cdd))
* execute a notebook ([2bae5b3](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/2bae5b37a33ba839e7caaa5cb79beee9dcec35f3))
* modify coverage ([ac06b05](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/ac06b0591c1e5abcf87dc28635069eded839d4be))
* modify coverage over multi-os ([9e15375](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/9e15375c4dec4a2b0f22f63bf4774b38a19fe1de))
* modify workflows ([542b38d](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/542b38d58e1786e61a1c4315c1da4fb756fbe85a))
* remove argument for negative sampling ([4b2dd9b](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/4b2dd9b5326403999e8a338dc0920a7ba4d67cc7))
* remove bash on workflows ([632b625](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/632b6251e10bdd479637931a2846b9efb4c19c55))
* remove check-path workflows ([68a434b](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/68a434bffa2c320ef07c55c867787b77bd44e83d))
* reorganize the dataset loaders ([319beca](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/319becab924cd7fdf4aa616dfc84cb015266ff5c))
* update biobridge ([d7e6eb9](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/d7e6eb97d7f00b16dfb5bbd6cc38bb686474e96f))
* update the approach to load PrimeKG ([d931aab](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/d931aab5827e50ec03dd69e85da8e4eeb14eb4f0))
* update workflow for installing reqs ([ad48b53](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/ad48b53e6f26ddd0f892d33187c39657de12d77c))


Features

* add biobridge-primekg loader ([27deb4e](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/27deb4e85cca9c13aaee7586d13b5ad242344a08))
* add embeddings for starkqa, node info for biobridge ([40cce60](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/40cce60c37caf4e6d101c4fc14159553ea4434eb))
* add primekg loader tool ([2e23586](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/2e235864fc89881aab8623d69db9720090d902bf))
* add starkqa-primekg loader tool ([989d2c4](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/989d2c4a48e94686156f68ea859fc2915cd29e38))
* add tutorials of talk2knowledgegraphs ([95c2af0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/95c2af0ca8fb65a55397e30e900a8c3d444a343e))
* include processed node information of StarkQA-PrimeKG ([2c82016](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/2c8201637bad452a5f195f47650b24a7c21575b9))
* update gha workflows ([783bc33](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/783bc3398dec91574c3ba449d53d784fc2d44358))
* update mkdocs for talk2knowledgegraphs ([29df106](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/29df106bd119d2bb231e0d9afc960aead8a10406))

[1.4.3](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.4.2...v1.4.3) (2025-01-09)


Bug Fixes

* delete plot_figure tool ([311f03d](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/311f03d22d96041a39a4af9720368fe5163f973b))
* Merge pull request [50](https://github.com/VirtualPatientEngine/AIAgents4Pharma/issues/50) from VirtualPatientEngine/fix/update-README ([6b8d70f](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/6b8d70fc12a0b4516f9f78fabba7428d19f52f3b))
* update custom_plotter test ([746e10e](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/746e10e9040086dab27cdc0ec4ee3087fb7178ff))
* update errors ([830b2a2](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/830b2a20cfdc118813de31208e075bacccdc1521))
* update errors ([0af71f0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/0af71f0ab72b6be657d01f987f6b5d4bc04e39e4))
* update mkdocs ([0c3e70d](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/0c3e70df04922ce1444423b6143ac9f8ee11dd5d))
* update README ([34597d5](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/34597d5504f100935683e9060ac884e33b4905fa))

[1.4.2](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.4.1...v1.4.2) (2025-01-04)


Bug Fixes

* Merge pull request [48](https://github.com/VirtualPatientEngine/AIAgents4Pharma/issues/48) from VirtualPatientEngine/fix/update-tests ([266d34c](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/266d34c2042c9024e80823e379ba2a3ab54bb753))
* update test_custom_plotter ([4655096](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/46550962f2e1e03337ba71351f2b0e95fea62cf3))
* update tests ([2f05ad1](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/2f05ad172acafd320f9ba0a0653d5d2a07b6daa0))
* update tests.yml ([7b3e33c](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/7b3e33c0f0b7197fbc4cbb5cbb241dd87c2b4b0e))
* update-tests ([7d10752](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/7d1075240233307a629d9a03c7f91791f4b925d5))

[1.4.1](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.4.0...v1.4.1) (2025-01-04)


Bug Fixes

* update tests for simulate model ([3cb153d](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/3cb153de0569b6d25870ff0420f1a7eb70558a89))

[1.4.0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.3.3...v1.4.0) (2024-12-14)


Bug Fixes

* update model_description ([05821c0](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/05821c0379f7dca79170c61cb93e00c6ce74eb43))
* update release workflow to run only on change in main folder ([24093dd](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/24093dd0f8cdbd3f1045666e19868584f9919b9f))


Features

* add no-openai-key msg and feedback buttons and login page ([60c7446](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/60c74468795e4a485328b2f901ebb1cbfce74b4e))

[1.3.3](https://github.com/VirtualPatientEngine/AIAgents4Pharma/compare/v1.3.2...v1.3.3) (2024-12-11)


Bug Fixes

* mkdocs-deploy yml ([afcc0b8](https://github.com/VirtualPatientEngine/AIAgents4Pharma/commit/afcc0b8a0b5377dfe85b65ee94139452c4ff0765))