Brainglobe-utils

Latest version: v0.6.3

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0.4.2

What's Changed
* add tests for transforming to atlas space function by alessandrofelder in https://github.com/brainglobe/brainglobe-utils/pull/38
* Fix test that is still importing bg-atlasapi by willGraham01 in https://github.com/brainglobe/brainglobe-utils/pull/40
* Convert image_io docstrings to numpydoc style by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/43
* Add minisblack photometric to tiff writing by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/46
* Tests for the image_io sub-module by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/48
* Add save_any function to image_io by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/51
* Convert general submodule docstrings to numpydoc by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/53
* Add tests for brainmapper sub-module by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/52
* Handle str and pathlib.Path consistently in image_io by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/54
* Use codecov token in test_and_deploy by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/55
* Use data path and fixtures consistently by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/58
* Refactor ImageIOLoadException by K-Meech in https://github.com/brainglobe/brainglobe-utils/pull/59

New Contributors
* K-Meech made their first contribution in https://github.com/brainglobe/brainglobe-utils/pull/43

**Full Changelog**: https://github.com/brainglobe/brainglobe-utils/compare/v0.4.1...v0.4.2

0.4.1

Bump to `brainglobe-atlasapi` dependency

`bg-atlasapi` has been renamed to `brainglobe-atlasapi`, so we now depend on the new package.

What's Changed
* bg-atlasapi -> brainglobe-atlasapi by willGraham01 in https://github.com/brainglobe/brainglobe-utils/pull/39


**Full Changelog**: https://github.com/brainglobe/brainglobe-utils/compare/v0.4.0...v0.4.1

0.4.0

Incorporate [`imio`](https://github.com/brainglobe/imio) functionality

What's Changed
* Debug failing regression test by willGraham01 in https://github.com/brainglobe/brainglobe-utils/pull/29
* Update test_and_deploy.yml by alessandrofelder in https://github.com/brainglobe/brainglobe-utils/pull/30
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/brainglobe-utils/pull/31
* Add manifest to ci by willGraham01 in https://github.com/brainglobe/brainglobe-utils/pull/32
* Merge imio in as `image_io` submodule by willGraham01 in https://github.com/brainglobe/brainglobe-utils/pull/33
* Add citation tool by willGraham01 in https://github.com/brainglobe/brainglobe-utils/pull/28

New Contributors
* alessandrofelder made their first contribution in https://github.com/brainglobe/brainglobe-utils/pull/30

**Full Changelog**: https://github.com/brainglobe/brainglobe-utils/compare/v0.3.6...v0.4.0

0.3.6

What's Changed
* Move qtpy functionality from brainglobe-segmentation & cellfinder by adamltyson in https://github.com/brainglobe/brainglobe-utils/pull/27


**Full Changelog**: https://github.com/brainglobe/brainglobe-utils/compare/v0.3.5...v0.3.6

0.3.5

What's Changed
* Add misc functionality from brainmapper by adamltyson in https://github.com/brainglobe/brainglobe-utils/pull/25


**Full Changelog**: https://github.com/brainglobe/brainglobe-utils/compare/v0.3.4...v0.3.5

0.3.4

What's Changed
* Collapsible Widget API v1.1 by IgorTatarnikov in https://github.com/brainglobe/brainglobe-utils/pull/23
* Add brainmapper analysis functionality by adamltyson in https://github.com/brainglobe/brainglobe-utils/pull/24


**Full Changelog**: https://github.com/brainglobe/brainglobe-utils/compare/v0.3.3...v0.3.4

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