Checkqc

Latest version: v4.0.5

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2.0.0rc1

Major changes:
Reads per sample are now counted per `sample name` instead of `sample ID`. It allows a sample to have multiple libraries in the same lane and still be counted as one sample. For example, in a run with the following sample sheet:

Sample_ID,Sample_Name
Pool1_1,Pool1
Pool1_2,Pool1
Pool2_1,Pool2
Pool2_2,Pool2

the sum of reads for **Pool1_1** and **Pool1_2** will be defined as the reads for **Pool1**. This was not the case in previous versions of CheckQC, where each unique `sample ID` was considered a sample.

Minor changes:


Note that this is a pre-release.

1.8.0rc1

1.7.2

This release fixes a minor bug where the error rate handler error message was odd.

1.7.1

The version was not properly updated in the last release (so version 1.7.0 will not be available via pypi). However v1.7.1 should fix this and contain the same updates as the previous release.

1.7.0

CheckQC now supports Novaseq S1, S2, and S4 flowcells. Enjoy!

1.6.2

This version updates nothing user facing, but facilitates the release process of checkQC by automatically using new releases to PyPI.

Tags v1.6.0 and v1.6.1 were attempts to get this working and can be disregarded.

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