Copasi-basico

Latest version: v0.81

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0.9

This release fixes an issue, where the mapping of experimental data to global parameters would be invalid.

0.8

This release fixes an issue, where an exception would occur on setting invalid scan items. This changes:

* `get_scan_items`: such that none existing values are not returned
* `set_scan_items`: when attempting to set none existing parameters, they are ignored

**Full Changelog**: https://github.com/copasi/basico/compare/v0.7...v0.8

0.7

Another bug fix release, since the time symbol was not correctly translated into a time reference when manually creating reports.

0.6

The last release introduced a bug, where running time course simulations with a selection list of items to collect did not work as intended. This fixes the issue. There are also now examples on how to use basico with `multiprocessing`, or `ipyparallel`.

**Full Changelog**: https://github.com/copasi/basico/compare/v0.5...v0.6

0.5

This release adds the capability to run optimizations in basico:

* [simple optimization example](https://basico.readthedocs.io/en/latest/notebooks/Optimization.html)

Also it should be easier to assign report filenames to tasks now, and additionally the `scheduled` key is used consistently.

**Full Changelog**: https://github.com/copasi/basico/compare/v0.4...v0.5

0.4

BasiCO contains a number of pure python scripts, that make it easier to work with the COPASI API.

This release contains a number of bug fixes along with the following new features:

* editing of report definitions
* modification of the COPASI scan task
* returning of statistics for parameter estimation runs
* filtering the function database so that only functions suitable for a given reaction are returned.

**Full Changelog**: https://github.com/copasi/basico/compare/v0.3...v0.4

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