Copasi-basico

Latest version: v0.83

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0.59

This release fixes an issue, where `get_parameters` or `get_species` would return expressions from the *current* model, rather than from the model that has been passed in. Additionally upon request get functions now return the `display_name` of elements additionally rather than just the `name`. Also `transition_time` is now returned when calling `get_species` which might be of interest after bringing the model to steady state.

**Full Changelog**: https://github.com/copasi/basico/compare/v0.58...v0.59

0.58

This release fixes an issue with `get_reaction_mappings` that on some systems would fail to provide the complete mapping of a reaction element. Additionally an issue is fixed when `set_task_settings` is used to change `Duration` / `StepNumber` of time courses, which unfortunately would sometimes not be correct. Also added two new methods:

* `get_model_name` returns the name of the current model
* `remove_loaded_models` removes all loaded models

0.57

This release fixes an issue in the plotting subroutine for the profile likelihood method.

0.56

This release ensures that parameter estimation tasks are executed, even if errors have been previously logged.

0.55

This is a bug fix release, that solves an issue (39) where creating a parameter set could cause other tasks to not run anymore.

0.54

This release fixes compatibility with python 3.12. Additionally it supports parameter scans over parameter sets, as was introduced with COPASI 4.42. It fixes issues when creating events with multiple assignments, and ensures that parametersets are correctly created from the current model state.

Examples:

- [Working with Parameter Sets](https://basico.readthedocs.io/en/latest/notebooks/Working_with_ParameterSets.html)

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