Ena-upload-cli

Latest version: v0.8.0

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0.5.2

What's Changed
* Automatic check if an object already exists on ENA by bedroesb in https://github.com/usegalaxy-eu/ena-upload-cli/pull/60


**Full Changelog**: https://github.com/usegalaxy-eu/ena-upload-cli/compare/0.5.1...0.5.2

0.5.1

What's Changed
* Hotfix for release/cancel to not require files by bedroesb in https://github.com/usegalaxy-eu/ena-upload-cli/pull/57
* Adding support for old sheet names + error handling when sheet is missing in xlsx template by bedroesb in https://github.com/usegalaxy-eu/ena-upload-cli/pull/58
* Hotfix by bedroesb in https://github.com/usegalaxy-eu/ena-upload-cli/pull/59


**Full Changelog**: https://github.com/usegalaxy-eu/ena-upload-cli/compare/0.5.0...0.5.1

0.5.0

With this release we would like to highlight a new feature: using xlsx templates as input file for the metadata instead of the usual (1-4) tsv tables. For every sample checklist you can find an example of such a xlsx template on this [repo](https://github.com/ELIXIR-Belgium/ENA-metadata-templates). Read more about in our readme!

0.4.5

**Implemented enhancements:**

- Supporting all optional fields in the run/experiment and study xml [\37](https://github.com/usegalaxy-eu/ena-upload-cli/issues/37)

**Closed issues:**

- Empty rows give error [\52](https://github.com/usegalaxy-eu/ena-upload-cli/issues/52)
- Support FTPS connection to protect account credidentials [\48](https://github.com/usegalaxy-eu/ena-upload-cli/issues/48)
- Add GitHub Action to check if new xsd templates are added to ENA [\14](https://github.com/usegalaxy-eu/ena-upload-cli/issues/14)

**Merged pull requests:**

- FTPS stability and speed improvements [\55](https://github.com/usegalaxy-eu/ena-upload-cli/pull/55) ([bedroesb](https://github.com/bedroesb))
- Drop empty rows [\54](https://github.com/usegalaxy-eu/ena-upload-cli/pull/54) ([bedroesb](https://github.com/bedroesb))
- Updating introduction [\51](https://github.com/usegalaxy-eu/ena-upload-cli/pull/51) ([bedroesb](https://github.com/bedroesb))
- Correct use of optional attributes in run/experiment and study tables [\46](https://github.com/usegalaxy-eu/ena-upload-cli/pull/46) ([bedroesb](https://github.com/bedroesb))

0.4.4

**Implemented enhancements:**

- Changing release date through API [\36](https://github.com/usegalaxy-eu/ena-upload-cli/issues/36)
- If table is given without action values, an error is thrown [\34](https://github.com/usegalaxy-eu/ena-upload-cli/issues/34)

**Merged pull requests:**

- Adding TLS to the ftp connection [\50](https://github.com/usegalaxy-eu/ena-upload-cli/pull/50) ([bedroesb](https://github.com/bedroesb))
- Create CITATION.cff [\49](https://github.com/usegalaxy-eu/ena-upload-cli/pull/49) ([bedroesb](https://github.com/bedroesb))
- Adding release and cancel as an action [\41](https://github.com/usegalaxy-eu/ena-upload-cli/pull/41) ([bedroesb](https://github.com/bedroesb))

0.4.3

**Implemented enhancements:**

- Adding flag to not do a submission but just to generate the XMLs [\43](https://github.com/usegalaxy-eu/ena-upload-cli/issues/43)
- If table is given without action values, an error is thrown [\34](https://github.com/usegalaxy-eu/ena-upload-cli/issues/34)

**Merged pull requests:**

- Handling tables that have no actions in the status column [\45](https://github.com/usegalaxy-eu/ena-upload-cli/pull/45) ([bedroesb](https://github.com/bedroesb))
- Adding draft flag to not perform a submission [\44](https://github.com/usegalaxy-eu/ena-upload-cli/pull/44) ([bedroesb](https://github.com/bedroesb))
- Automatic update of ENA Sample Checklists [\42](https://github.com/usegalaxy-eu/ena-upload-cli/pull/42) ([github-actions[bot]](https://github.com/apps/github-actions))

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