Gpy

Fix

* Bdist_dumb and bdist_rpm. [mzwiessele]

* Samples tests and plotting, multioutput. [mzwiessele]

* Py37 cython not compatible. [mzwiessele]

Other

* Bump version: 1.9.3 → 1.9.4. [mzwiessele]

* Pkg: merged and tested, no py37. [mzwiessele]

* Pkg: no py37 still does not work. [mzwiessele]

* Add py37. [mzwiessele]

* Add py37. [mzwiessele]

* Merge branch 'cython-fix' of git://github.com/jayanthkoushik/GPy into jayanthkoushik-cython-fix. [mzwiessele]

* Ensure numpy version is used in coregionalize cython test. [Jayanth Koushik]

* Use explicity cython/numpy variants in coregionalize test. [Jayanth Koushik]

* Fix cython check in linalg. [Jayanth Koushik]

* Don't override global cython config in tests. [Jayanth Koushik]

* Refactor checking for cython availability. [Jayanth Koushik]

* Use correct cython check in kernel_tests.py. [Jayanth Koushik]

* Merge branch 'devel' into esiivola-feature-multioutput. [mzwiessele]

* Merge branch 'devel' into devel. [Neil Lawrence]

* Rewrite poster_samples_f to return NxDxsize. [Neil Lawrence]

* Testing for dims should be checking whether 2nd dim is greater than 1. [Neil Lawrence]

* Update gp.py. [Neil Lawrence]

Sample return seemed to have been based on number of training data, not number of posterior samples requested.

* Merge pull request 668 from RobRomijnders/devel. [Zhenwen Dai]

fix typo in docstring for GP.opimize()

* Fix typo in docstring for GP.opimize() [robromijnders]

* Merge pull request 648 from marpulli/symmetric_kernel. [Zhenwen Dai]

Add Symmetric kernel

* Expand class description and some speed improvements. [Mark Pullin]

* Make symmetric kernel work with python 2.7. [Mark Pullin]

* Add param descriptions. [Mark Pullin]

* Add symmetric kernel. [Mark Pullin]

* Merge pull request 654 from palindromik/devel. [Zhenwen Dai]

Return deserialized models with actual type instead of base type

* Return deserialized models with actual type instead of base type. [Keerthana Elango]

* Merge branch 'feature-multioutput' of https://github.com/esiivola/GPy into esiivola-feature-multioutput. [mzwiessele]

* Merge remote-tracking branch 'origin/devel' into feature-multioutput. [Eero Siivola]

* Modified likelihoods test to better test multioutput likelihood. [Eero Siivola]

* Added a notice of the correspondence of the likelihood structure to the one of GPstuff due to their request. [Eero Siivola]

* Added a new class that enables using multiple likelihoods for multioutput case (previously, Mixed noise only allowed use of multiple gaussians) [Siivola Eero]

* Pkg: CHANGELOG. [mzwiessele]

Fix

* Python=3.7. [mzwiessele]

Other

* Bump version: 1.9.2 → 1.9.3. [mzwiessele]

* Merge pull request 655 from davidsmf/patch-2. [Zhenwen Dai]

Allow setup.py to be parsed without numpy

* Allow setup.py to be parsed without numpy. [David Sheldon]

If numpy isn't available, don't define ext_mods, pip will then determine numpy is required, install it, then call us again.

Fixes 653

* Merge pull request 640 from pgmoren/devel. [Zhenwen Dai]

Sparse GP serialization

* Serialization: Add docstrings. [Moreno]

* Sparse GP serialization. [Moreno]

* Merge pull request 613 from dtorrejo/Multi_sample_bug. [Max Zwiessele]

Fixes the dimensions of the samples output

* Maintains consistency with numpy arrays. [Diego Torrejon]

* Fixes the dimensions of the samples output. [Diego Torrejon]

* Merge pull request 607 from pgmoren/devel. [Zhenwen Dai]

Add serialization functions for EPDTC

* Add serialization functions for EPDTC. [Moreno]

* Merge pull request 604 from SheffieldML/deploy. [Max Zwiessele]

Deploy

* Use old deploy pypi behavior. [Max Zwiessele]

Until skip_existing option exists, use the old travis dpl behaviour to not fail on existing files.

* Don’t build docs anymore in travis. [Max Zwiessele]

* Merge pull request 603 from SheffieldML/devel. [Max Zwiessele]

1.9.*

Fix

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

* Rtd. [mzwiessele]

Other

* Bump version: 1.9.1 → 1.9.2. [mzwiessele]

Fix

* Paramz newest version. [mzwiessele]

Other

* Bump version: 1.9.0 → 1.9.1. [mzwiessele]

Other

* Bump version: 1.8.7 → 1.9.0. [mzwiessele]

Fix

* Merge deploy back into devel. [mzwiessele]

Other

* Bump version: 1.8.6 → 1.8.7. [mzwiessele]

* Deploy version 1.8.5. [Zhenwen Dai]

* added extended version of MLP function with multiple hidden layers and different activation functions

* Update mapping_tests.py

Make output of gradient check verbose to diagnose error

* Update mapping_tests.py

Remove verbosity again after gradient checks passed without problem with verbosity

* the implementation of SVI-MOGP

* Try to fix the issue with model_tests

* updated mapping test to pass gradient checks

* Fix random seed for reproducible results in tests

* Add mean function functionality to dtc inference method

* Fix DSYR function (See https://github.com/scipy/scipy/issues/8155)

* Updated sde_kern to work with scipy=1.0.0

* Trying to fix tests for Matplotlib plotting issue

* Testing Again 575

* Figured it must be a matplotlib import error 575

New import matplotlib must be missing a package

* Removed ImageComparisonFailure 575

ImageComparisonFailure no longer exists which causes issues with travis testing using the most recent matplotlib

* Fix EP for non-zero mean GP priors

* improve the documentation for LVMOGP

* remove non-ascii characters

* Small correction to doc

* add type into docstring

* update changelog for 1.8.5

* bump the version: 1.8.4 -> 1.8.5