Iva

Latest version: v1.0.9

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0.10.1

Bug fix: iva_qc now writes file of contigs that did not hit the reference
Bug fix: string decode related erors for certain Python versions

0.10.0

Bug fixes with PCR primer trimming.
If trimmomatic is used then by default trim reads using quality scores

0.9.0

Assembly: trim adapters and PCR primers off contig ends after assembling.

QC: write FASTA of contigs that do not match the reference genome.

0.8.0

Added option --pcr_primer to trim PCR primer sequences from reads before assembling.

0.7.2

Bug fix, so that now works on Ubuntu 14.04 with latest pysam.

0.7.1

Little bug fix with iva_qc stat ref_sequences_assembled_ok, now more stringent.
Update readme to just have installation instructions, as help etc is now on wiki pages.

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