Lapdog

Bug Fixes:
* Resolved a bug in the `register` endpoint which prevented the Lapdog proxy group from being created

Bug Fixes:
* Resolved a bug in the UI controllers which prevented automatic gateway registration
* Resolved a bug in the cloud utilities which prevented endpoints from querying the list of available cryptographic keys
* Resolved a bug in `setup.py` which prevented the `lapdog.cloud` module from being distributed

Patch Contents
* Updated role definitions for `Core_account` and `Functions_account`

Bug Fixes:
* Fixed a bug preventing Lapdog from recognizing Engines as initialized
* Fixed a bug preventing some Google Cloud timestamps from being parsed

New Features:
* Added the `lapdog apply-patch` function
* The operations cache now uses a timeout when reading from FireCloud
* 5s timeout for data which is already present in the cache
* 30s timeout for data which is not cached
* Parallelized `lapdog.WorkspaceManager.update_participant_entities`
* Listing submissions now falls back on the slower `google-cloud-storage` backend
if `gsutil` is not visible on the PATH
* Submission data can be updated by calling `lapdog.SubmissionAdapter.update_data()`
* Added docstrings to all classes and methods which make up the primary lapdog interface
* `lapdog.SubmissionAdapter.cost()` now also reports the portion of the cost which is due to the Cromwell server

Patch Contents
* All endpoints set to version `v1`. Serial versioning will be used from now on
* Updated the Cromwell image tag to `v0.12.0`

Bug Fixes:
* Prevented `lapdog.WorkspaceManager` from re-synchronizing the workspace after executing a job, if the workspace was previously offline
* Fixed an error that was preventing Cromwell from retying queries if a previous query timed out

New Features:
* Lapdog Cloud Endpoints now use the latest cryptograpic key in the project, instead of
hard coding the 1st
* The Cromwell driver now recognizes when Cromwell crashes and adds helpful error messages
* Added a notice on the UI homepage when the local lapdog version is out of date

Other Changes:
* Reorganized `lapdog.cloud` code into a module

New Features:
* Added `lapdog.WorkspaceManager.build_retry_set` to automatically build an entity set of failed entities from a submission
* All controllers for the Lapdog UI now log their runtime in the console

Other Changes:
* Improved error messages displayed in UI when submitting a new job fails

Other Changes:
* `lapdog.WorkspaceManager.execute` now raises a `ValueError` if it expects that input metadata will exceed the PAPIv2 size limit