Maboss

Latest version: v0.8.10

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0.8.3

New sensitivity analysis API allowing a quick definition of simulation of single, double mutants and their analysis. The documentation of this API is available at : https://pymaboss.readthedocs.io/en/latest/api/sensitivity_api.html

Bugfixes :
- Fix simulation chaining in UPMaBoSS when using cmaboss
- Fix node count (and maboss MAXNODES selection) when parsing sbml-qual models
- Fix scikit-learn dependency

0.8.2

- UPMaBoSS performance improvements
- New functions for sensitivity analysis

0.8.1

Fix a bug introduced in set_istates, and another in the conda package specification.

0.8.0

- Implementation of SBML-qual compatibility, using cmaboss

> sim = maboss.loadSBML(sbml_filename, cfg_filename, use_sbml_names=True)

This will load the sbml file with the given cfg file, or a default one if no cfg filename is given. use_sbml_names chooses if we should use the SBML name of SBML id to name the node in the MaBoSS model.

- Ensembles of MaBoSS models
- Fix FP table for MaBoSS server results
- Added warning when unbinding nodes

0.7.19

* fix `get_initial_state` with joined nodes (48)

0.7.18

- Remove restriction in the variables' name preventing them to contain boolean operators.
- Introduction of a list of reserved names, which can't be used (True, False, And, Or, Xor, Not, Node)
- Fix bug in plotting entropy

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