Mesmerize-core

Latest version: v0.4.0

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0.4.0

What's Changed
* reorganize demos, use mesviz by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/242
* int32 not sufficient for nbytes by nspiller in https://github.com/nel-lab/mesmerize-core/pull/279

New Contributors
* nspiller made their first contribution in https://github.com/nel-lab/mesmerize-core/pull/279

**Full Changelog**: https://github.com/nel-lab/mesmerize-core/compare/v0.3.0...v0.4.0

0.3.0

What's Changed
* allow passing kwargs from `LazyVideo` to `decord.VideoReader` by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/204
* update notebooks by clewis7 in https://github.com/nel-lab/mesmerize-core/pull/218
* Update install instructions for caimanmanager by rly in https://github.com/nel-lab/mesmerize-core/pull/228
* fix `get_params_diff()`, return as dataframe instead of series of dicts by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/233
* Small fixes by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/238

New Contributors
* rly made their first contribution in https://github.com/nel-lab/mesmerize-core/pull/228

**Full Changelog**: https://github.com/nel-lab/mesmerize-core/compare/v0.2.2...v0.3.0

0.2.2

What's Changed
* fixing bug in time() by clewis7 in https://github.com/nel-lab/mesmerize-core/pull/188
* fix WrongAlgorithMException error message in `validate()` by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/189
* allow manually setting shape by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/192
* allow removing failed or not run items by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/202


**Full Changelog**: https://github.com/nel-lab/mesmerize-core/compare/v0.2.1...v0.2.2

0.2.1

Fixes
- better cnmfe runner, 184
- added cnmfe demo notebook

What's Changed
* fix cnmfe algo runner by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/184
* cnmfe demo by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/185

**Full Changelog**: https://github.com/nel-lab/mesmerize-core/compare/v0.2.0...v0.2.1

0.2.0

New
* `LazyVideo` is a new `LazyArray` type which uses [`decord`](https://github.com/dmlc/decord) for fast random access loading of frames #175
* `caiman.get_input_movie()` can take kwargs that are passed to the movie reader function. 167

Fixes
* `LazyArray` types did not work with window functions in `fastplotlib.ImageWidget`, they work after 175. The specific fix was to allow `LazyArray` to work with `range` objects that are passed by `fastplotlib.ImageWidget`: https://github.com/nel-lab/mesmerize-core/pull/175/commits/49a4004aaa9af20f4f142cb0ca1a677103820722

What's Changed
* more `LazyArray` stuff by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/175
* allow movie_reader kwargs for caiman.get_input_movie() by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/167

**Full Changelog**: https://github.com/nel-lab/mesmerize-core/compare/v0.1.0...v0.2.0

0.1.0

First full release!

Breaking changes from the beta
- Introduced `LazyArrays` for various CNMF outputs, 140
- better handling of input movies 146

Fixes
- 130, fix 116 by adding a local backend in that is used by default on Windows, completing bypassing all the subprocess stuff
- 126, safety check to prevent small subdataframe from overwriting a large dataframe on disk, default max delta of num_rows is 1
- other changes see: https://github.com/nel-lab/mesmerize-core/milestone/3?closed=1

All PRs in this release
* fixing threshold for tests to pass in pipeline by clewis7 in https://github.com/nel-lab/mesmerize-core/pull/115
* make sure parent raw data path exists, else throw exception by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/118
* allow passing `pd.Series` batch item directly as `input_movie_path` to`'caiman.add_item()` by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/124
* safety check to prevent small sub dataframe from overwriting full dataframe on disk by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/126
* add local backend to `caiman.run()` by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/131
* movie reader, tiff memmap, caiman memmap and pims by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/146
* made better docstrings by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/147
* Popen.wait() called by default using 'wait' kwarg to caiman.run() by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/148
* Lazy arrays by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/140
* V0.1 dev -> master by kushalkolar in https://github.com/nel-lab/mesmerize-core/pull/155
* adding timestamp features by clewis7 in https://github.com/nel-lab/mesmerize-core/pull/141

**Full Changelog**: https://github.com/nel-lab/mesmerize-core/compare/v0.1.0.b1...v0.1.0

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