**Major**
- Add helper functions to simplify Aligner construction (26b0b602449703e177bdb2085f707d784a47a0aa)
- Pixel size matching when choosing thumbnails
- Manual set reader pixel size (387a64ad3e853a479344e81ab5f85e750b75700d)
- Try different moving image orientations and use the one with max number of matches (d46e17a1fbedcdd4d163dbc337aac9c22903bc58)
- Can use compression when writing to disk (40861a904546f03e603ef4aadb8a4015d1a7ab90)
**Misc**
- Add utility function to generate grid labeled mask and handle mask downsample
- Misc improvements (cfbad154dc266c7fa10a5b3c961239565c124348, 7c01725821654495302c170fd03ec43c8e2519c5, 7c81c9efb9be6bc475c98b0ffcf49d1f9d07c96a)
- Viz computed shifts (9187df640d40117b758799091bcf93d629533f72)