Palom

Latest version: v2024.12.1

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2022.3.1

- Allow downsampling factor other than 4 to be used in `pyramid.write_pyramid`
- Temporary pin Zarr version (>=2.10.0, <2.11) until the issue in 2.11 is resolved

2022.02.0

Major
- Support non-pyramidal and non-tiled tiff
- Fix affine matrix computation to handle different pixel size target images
- Use entropy to detect whether an image is a brightfield or fluorescent image (was using `dtype`)

Minor
- Support single channel and RGB(A) input image
- Switch to `cv2.INTER_AREA` for better downsizing interpolation
- Open optional blurring and upsampling during block phase correlation

**Full Changelog**: https://github.com/Yu-AnChen/palom/compare/v2021.12.0...v2022.02.0

2021.12.0

- Add `hdx` (`H DAB`) color deconvolution mode
- Add function to auto select thumbnail level for coarse alignment

2021.11.2

- Add helper to auto-generate configuration file for `palom-svs run`
- Refactor `reader` and `align` class logic
- Add `color` module

2021.11.1

- Add CLI for processing SVS files
- Writes QC files and log along with the OME-TIFF image

2021.11.0

- Initial pre-release, contains basic operations
- Currently can be used by scripting

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