Pharokka

Latest version: v1.7.5

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1.0.1

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* Minor release to fix a string-parsing bug where pharokka v1.0.0 would crash when certain VFDB virulence factors were detected.

1.0.0

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* Removes errors (with post_processing functions not being parsed as strings) to improve robustness.
* Codebase more reliable and consistent
* Overhaul of install_databases.py
* Adds pre-existing Pharokka Database available at https://zenodo.org/record/7081772

0.1.11

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* Adds CARD and VFDB databases.

0.1.10

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* Fixes issues with Genbank output files.

0.1.9

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* Fixes bug with parsing Aragorn output for some phages.
* Fixes bug with phages with no mmseqs2 PHROGs hits (for some very small phages).

0.1.8

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* Minor release.
* Fixes bug with install_databases.py.
* Adds locustag to .tbl output.

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