* Removes hh-suite dependency to reduce run-time (redundant with e-value option). * Adds e-value option for passing into mmseqs2. * Adds CRISPR detection using MinCED. * Adds tmRNA detection using Aragorn. * Adds CDS coding density to _length_gc_cds_density.tsv.
0.1.6
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* Version update for bioconda release
0.1.5
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* Adds Prodigal option for gene prediction -g prodigal * Handles metagenome assembled virus contigs (that may have no genes) with -m flag * Fixes tRNA count bug in cds_functions.tsv