- Fixed large offset seek error on windows - Fixed PyUnicode_AsUTF8 const char type warning - Changed sequence read line by line function - Changed gzread to fread for fastq information
0.6.7
^^^^^^^^^^^^^^^^^^^^^^^^^^
- Added check for fasta/q format when open file - Added benchmark scripts for evaluating performance - Speed up the fasta/q object iteration - Optimzed str length warning caused by strlen
0.6.6
^^^^^^^^^^^^^^^^^^^^^^^^^^
- Fixed incorrect sliced sequence name - Fixed seq,identifier,read object memory dealloc - Changed description text into description length in index file
0.6.5
^^^^^^^^^^^^^^^^^^^^^^^^^^
- Reduced memory usage when building index for large fasta - Removed rebuild_index method from Fasta object due to segmentation fault - Optimized compatibility between sqlite3 and python GIL
0.6.4
^^^^^^^^^^^^^^^^^^^^^^^^^^
- Fixed last sequence fetching error caused by missing \n - Improved fasta/q object key error message to make it more human
0.6.3
^^^^^^^^^^^^^^^^^^^^^^^^^^
- Added .raw attribute to sequence object to get seq raw string - Added .raw attribute to read object to get read raw string - Added .description to read object to get full header line - Added iteration for sequence object from FASTA object - Added iteration for tuple from FASTQ object - Changed FASTA class parameter composition to full_index