Pyranges

Latest version: v0.1.2

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0.0.36

Additions:
- add insert method which uses overlap

Changes:
- read_bed does not fail when strand is "."
- read_bed considers bed unstranded if Strand has other values than +/-

0.0.35

Changes:
- tssify/tesify renamed five_end/three_end
- five_end/three end fails when data does not contain strand

Fixes:
- slack changed pyrange in-place

0.0.34

Fixes:
- assign changed pyrange in-place

0.0.33

Changes:
- minor bugfix

0.0.32

Changes:
- Use gr.to_bed for output_methods, not gr.out.bed
- Remove copy_df flag in constructor; using df.copy() is terser
- change flag extended in constructor to int64 (default False)

0.0.31

Changes:
- Make int32 default for Start/End

Additions:
- PyRanges now has window-function, like bedtools makewindows

Fixes:
- getitem sometimes returned int32-pyrange despite being given int64-pyrange
- doing nearest two times in a row sometimes failed due to minor suffix-bug

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