Scipy-stubs

This release

Highlights
* annotated all of `scipy.signal.windows` (153)
* annotated and tested the `scipy.signal` [spectral analysis functions](https://docs.scipy.org/doc/scipy/reference/signal.html#spectral-analysis) (157)
* `periodogram`
* `spectrogram`
* `welch`
* `lombscargle`
* `csd`
* `coherence`
* `stft` and `istft`
* `check_COLA` and `check_NOLA`
* improved and fixes many `scipy.optimize` functions (167), including
* every flavor of `OptimizeResult`
* `minimize` and `minimize_scalar`
* `brute`, `differential_evolution`, `shgo`, and `direct`
* `root` and `RootResults`
* `brentq`, `brenth`, `ridder`, `bisect`, `newton`, `toms748`
* `nnls`, `lsq_linear` and `isotonic_regression`
* `least_squares`
* `linprog` and `milp`
* `fmin` & co. (legacy)
* ... and several others

What's Changed
* use `basedmypy[faster-cache]` by jorenham in https://github.com/jorenham/scipy-stubs/pull/150
* bump `ruff` to `0.7.2` by jorenham in https://github.com/jorenham/scipy-stubs/pull/151
* prepare for further development by jorenham in https://github.com/jorenham/scipy-stubs/pull/152
* sync `integrate._typing.QuadOpts` with `integrate.quad` kwargs by jorenham in https://github.com/jorenham/scipy-stubs/pull/156
* `signal.windows`: Add type stubs for `_windows.pyi`. by pavyamsiri in https://github.com/jorenham/scipy-stubs/pull/153
* `signal`: Add type stubs to `_spectral_py.pyi`. by pavyamsiri in https://github.com/jorenham/scipy-stubs/pull/157
* fix and improve `scipy.signal._peak_finding` by jorenham in https://github.com/jorenham/scipy-stubs/pull/161
* fix and improve `scipy.spatial._[c]kdtree` by jorenham in https://github.com/jorenham/scipy-stubs/pull/162
* fix and improve `scipy.fft._helper` by jorenham in https://github.com/jorenham/scipy-stubs/pull/164
* fix and improve `scipy.linalg._decomp` by jorenham in https://github.com/jorenham/scipy-stubs/pull/165
* add missing `__all__` in `scipy.optimize` by jorenham in https://github.com/jorenham/scipy-stubs/pull/166
* fix and improve `scipy.optimize._optimize` by jorenham in https://github.com/jorenham/scipy-stubs/pull/167
* bump `ruff` to `0.7.3` by jorenham in https://github.com/jorenham/scipy-stubs/pull/170
* bump `basedpyright` to `1.21.0` by jorenham in https://github.com/jorenham/scipy-stubs/pull/171
* fix incorrectly rejected `ndarray` in `scipy.stats.qmc` by jorenham in https://github.com/jorenham/scipy-stubs/pull/172


**Full Changelog**: https://github.com/jorenham/scipy-stubs/compare/v1.14.1.2...v1.14.1.3

Highlights

- fully annotated `scipy.stats` (https://github.com/jorenham/scipy-stubs/pull/135)
- fully annotated `scipy.fft` (https://github.com/jorenham/scipy-stubs/pull/142)

Fixes

- `scipy.integrate.quad` rejected all callables if `args` was passed (https://github.com/jorenham/scipy-stubs/pull/141)
- `scipy.stats.permutation_test` rejected `statistic` with multiple parameters (https://github.com/jorenham/scipy-stubs/pull/143)

Merged PR's
* update development dependencies by jorenham in https://github.com/jorenham/scipy-stubs/pull/133
* complete `scipy.stats` by jorenham in https://github.com/jorenham/scipy-stubs/pull/135
* bump `basedpyright` to `1.19.1` and `tox` to `4.23.2` by jorenham in https://github.com/jorenham/scipy-stubs/pull/136
* use utf8 emoji's for pypi compat by jorenham in https://github.com/jorenham/scipy-stubs/pull/137
* bump `ruff` to `0.7.1` by jorenham in https://github.com/jorenham/scipy-stubs/pull/138
* fix `scipy.integrate` quad function parameter types by jorenham in https://github.com/jorenham/scipy-stubs/pull/141
* complete `scipy.fft` by jorenham in https://github.com/jorenham/scipy-stubs/pull/142
* fix permutation_test statistic callback type by graingert-coef in https://github.com/jorenham/scipy-stubs/pull/143
* bump `basedpyright` to `1.20.0` by jorenham in https://github.com/jorenham/scipy-stubs/pull/144
* fix dependabot target branch and include github-actions by jorenham in https://github.com/jorenham/scipy-stubs/pull/145
* configure and enforce `repo-review`, `codespell`, and `mdformat` by jorenham in https://github.com/jorenham/scipy-stubs/pull/146
* bump to `basedmypy 2.7.0` (`mypy 1.3.0`) by jorenham in https://github.com/jorenham/scipy-stubs/pull/147
* include more cache directories in the `poe clean` dev command by jorenham in https://github.com/jorenham/scipy-stubs/pull/148
* Restructured type-tests and related documentation by jorenham in https://github.com/jorenham/scipy-stubs/pull/149

New Contributors
* graingert-coef made their first contribution in https://github.com/jorenham/scipy-stubs/pull/143

**Full Changelog**: https://github.com/jorenham/scipy-stubs/compare/v1.14.1.1...v1.14.1.2

What's Changed
* fix and improve `scipy.optimize.minimize` by jorenham in https://github.com/jorenham/scipy-stubs/pull/86
* bump `basedpyright` to `1.19.0` and `tox` to `4.23.0` by jorenham in https://github.com/jorenham/scipy-stubs/pull/88
* codemod for missing annotations by jorenham in https://github.com/jorenham/scipy-stubs/pull/89
* bump `ruff` to `0.7.0`, and enable `ANN` by jorenham in https://github.com/jorenham/scipy-stubs/pull/90
* add `.mypy_cache` to `.gitignore` by jorenham in https://github.com/jorenham/scipy-stubs/pull/91
* codemod for params with missing trailing comma by jorenham in https://github.com/jorenham/scipy-stubs/pull/94
* fix the remaining pyright errors by jorenham in https://github.com/jorenham/scipy-stubs/pull/95
* made `scipy` optional, and loosened the version restrictions by jorenham in https://github.com/jorenham/scipy-stubs/pull/96
* complete `scipy.linalg` by jorenham in https://github.com/jorenham/scipy-stubs/pull/109
* run `basedpyright` in `pre-commit` by jorenham in https://github.com/jorenham/scipy-stubs/pull/110
* complete `scipy.io` by jorenham in https://github.com/jorenham/scipy-stubs/pull/112
* simple contributing guide by jorenham in https://github.com/jorenham/scipy-stubs/pull/108
* refactor contextmanagers with a type-check-only mixins by jorenham in https://github.com/jorenham/scipy-stubs/pull/113
* use `Any` for `Untyped` by jorenham in https://github.com/jorenham/scipy-stubs/pull/114
* complete and improve `scipy._lib` by jorenham in https://github.com/jorenham/scipy-stubs/pull/116
* complete `scipy.spatial` by jorenham in https://github.com/jorenham/scipy-stubs/pull/117
* Add type stubs to `scipy/signal/_peak_finding.pyi` by pavyamsiri in https://github.com/jorenham/scipy-stubs/pull/87
* complete `scipy.odr` by jorenham in https://github.com/jorenham/scipy-stubs/pull/119
* combine `allowlist.txt` rules as regexes by jorenham in https://github.com/jorenham/scipy-stubs/pull/122
* explicit python version pypi classifiers by jorenham in https://github.com/jorenham/scipy-stubs/pull/123
* configure pyright execution environments by jorenham in https://github.com/jorenham/scipy-stubs/pull/125
* complete `scipy.fft.dct`, and add relevant type aliases by Avasam in https://github.com/jorenham/scipy-stubs/pull/118
* complete `scipy.fftpack` by jorenham in https://github.com/jorenham/scipy-stubs/pull/121
* complete `scipy.signal._savitzky_golay` by pavyamsiri in https://github.com/jorenham/scipy-stubs/pull/124
* complete `scipy.integrate` by jorenham in https://github.com/jorenham/scipy-stubs/pull/128
* manual typing fixes on numpy 1.24 and python 3.10 by jorenham in https://github.com/jorenham/scipy-stubs/pull/131

New Contributors
* Avasam made their first contribution in https://github.com/jorenham/scipy-stubs/pull/118

**Full Changelog**: https://github.com/jorenham/scipy-stubs/compare/v1.14.1.0...v1.14.1.1

What's Changed
* improved `scipy.stats.distributions` by jorenham in https://github.com/jorenham/scipy-stubs/pull/43
* bump basedpyright to 1.17.3 by jorenham in https://github.com/jorenham/scipy-stubs/pull/44
* more poe tasks & CI typetesting by jorenham in https://github.com/jorenham/scipy-stubs/pull/45
* `scipy.optimize` (partial) by jorenham in https://github.com/jorenham/scipy-stubs/pull/46
* First pass on dealing with public private modules: Re-export attributes of public private modules through `__all__` by pavyamsiri in https://github.com/jorenham/scipy-stubs/pull/54
* update the development dependencies by jorenham in https://github.com/jorenham/scipy-stubs/pull/55
* use 4-space indentation for toml by jorenham in https://github.com/jorenham/scipy-stubs/pull/56
* configure pre-commit by jorenham in https://github.com/jorenham/scipy-stubs/pull/57
* stubtest specific packages by jorenham in https://github.com/jorenham/scipy-stubs/pull/58
* completed `scipy.io` by jorenham in https://github.com/jorenham/scipy-stubs/pull/59
* fix pyright error in `scipy.cluster` by jorenham in https://github.com/jorenham/scipy-stubs/pull/60
* deal with deprecated `scipy.integrate` modules by jorenham in https://github.com/jorenham/scipy-stubs/pull/61
* deal with deprecated `scipy.linalg` modules by jorenham in https://github.com/jorenham/scipy-stubs/pull/62
* deal with deprecated `scipy.constants` modules by jorenham in https://github.com/jorenham/scipy-stubs/pull/63
* `scipy.interpolate` by jorenham in https://github.com/jorenham/scipy-stubs/pull/64
* bump `basedpyright` to `1.18.4` by jorenham in https://github.com/jorenham/scipy-stubs/pull/65
* fix version number and stop using `verifytypes` by jorenham in https://github.com/jorenham/scipy-stubs/pull/67
* move `./typetests` to `./tests/typetests` by jorenham in https://github.com/jorenham/scipy-stubs/pull/70
* improved `README.md` by jorenham in https://github.com/jorenham/scipy-stubs/pull/71
* `scipy.ndimage` by jorenham in https://github.com/jorenham/scipy-stubs/pull/72
* fix pyright errors in `scipy.odr` by jorenham in https://github.com/jorenham/scipy-stubs/pull/73
* `scipy.spatial` by jorenham in https://github.com/jorenham/scipy-stubs/pull/74
* Streamlined `README.md` by jorenham in https://github.com/jorenham/scipy-stubs/pull/75
* `scipy._lib` by jorenham in https://github.com/jorenham/scipy-stubs/pull/76
* fix `stubtest` build errors in `scipy.stats` by jorenham in https://github.com/jorenham/scipy-stubs/pull/77
* fix `scipy.signal` stubtest by jorenham in https://github.com/jorenham/scipy-stubs/pull/78
* Final pass over the deprecated public modules by pavyamsiri in https://github.com/jorenham/scipy-stubs/pull/79
* fix `scipy.stats` stubtest by jorenham in https://github.com/jorenham/scipy-stubs/pull/80
* improved `scipy.LowLevelCallable` by jorenham in https://github.com/jorenham/scipy-stubs/pull/82
* fix `scipy.sparse` stubtests by jorenham in https://github.com/jorenham/scipy-stubs/pull/83
* fix mypy errors in `scipy.signal` by jorenham in https://github.com/jorenham/scipy-stubs/pull/84
* configure tox by jorenham in https://github.com/jorenham/scipy-stubs/pull/85

New Contributors
* pavyamsiri made their first contribution in https://github.com/jorenham/scipy-stubs/pull/54

**Full Changelog**: https://github.com/jorenham/scipy-stubs/compare/v1.4.1a3...v1.14.1.0

What's Changed
* `scipy.integrate` by jorenham in https://github.com/jorenham/scipy-stubs/pull/11
* update development dependencies by jorenham in https://github.com/jorenham/scipy-stubs/pull/12
* `scipy.__init__` by jorenham in https://github.com/jorenham/scipy-stubs/pull/13
* fix stubtest `__all__` errors by jorenham in https://github.com/jorenham/scipy-stubs/pull/14
* add `poe` commands by jorenham in https://github.com/jorenham/scipy-stubs/pull/15
* `scipy.version` by jorenham in https://github.com/jorenham/scipy-stubs/pull/16
* fix `scipy.stats.distributions` stubtests by jorenham in https://github.com/jorenham/scipy-stubs/pull/17
* fix `scipy.integrate` stubtests by jorenham in https://github.com/jorenham/scipy-stubs/pull/18
* `scipy.datasets` by jorenham in https://github.com/jorenham/scipy-stubs/pull/19
* stop incorrectly using `basedpyright --verifytypes` by jorenham in https://github.com/jorenham/scipy-stubs/pull/20
* fix `scipy.LowLevelCallable` stubtests by jorenham in https://github.com/jorenham/scipy-stubs/pull/21
* fix `scipy.linalg` stubtests by jorenham in https://github.com/jorenham/scipy-stubs/pull/22
* `scipy.cluster` by jorenham in https://github.com/jorenham/scipy-stubs/pull/23
* `scipy.misc` by jorenham in https://github.com/jorenham/scipy-stubs/pull/24
* `scipy.special.cython_special` by jorenham in https://github.com/jorenham/scipy-stubs/pull/25
* `scipy.special` by jorenham in https://github.com/jorenham/scipy-stubs/pull/26
* bump ruff to 0.6.4 by jorenham in https://github.com/jorenham/scipy-stubs/pull/28
* some `README.md` fixes and improvements by jorenham in https://github.com/jorenham/scipy-stubs/pull/29


**Full Changelog**: https://github.com/jorenham/scipy-stubs/compare/v1.14.1a1...v1.14.1a2

First official (pre-)release

**Full Changelog**: https://github.com/jorenham/scipy-stubs/commits/v1.14.1a1