Siibra

Latest version: v1.0.1a1

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1.0.1alpha.1

What's Changed
* maint: `region.supported_spaces` and `region.mapped_in_space()` by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/635
* Add codespell support (config, workflow to detect/not fix) and make it fix few typos by yarikoptic in https://github.com/FZJ-INM1-BDA/siibra-python/pull/638
* Fix: query BigBrainProfileIntensity with locations by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/637
* Allow random cmap creation for `map.get_color_map` by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/641

New Contributors
* yarikoptic made their first contribution in https://github.com/FZJ-INM1-BDA/siibra-python/pull/638

**Full Changelog**: https://github.com/FZJ-INM1-BDA/siibra-python/compare/v1.0.1-alpha.0...v1.0.1-alpha.1

1.0.1alpha.0

**Full Changelog**: https://github.com/FZJ-INM1-BDA/siibra-python/compare/v1.0.0-alpha.1...v1.0.1-alpha.0

Same changelog as https://github.com/FZJ-INM1-BDA/siibra-python/releases/tag/v1.0.0-alpha.1.

1.0a19

What's Changed
* Fix boundingbox transformation by dickscheid in https://github.com/FZJ-INM1-BDA/siibra-python/pull/591
* Fix: get_region(spec) exact match if spec is a region key by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/598
* clip voi to template's to if voi lies partially outside of the template by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/606
* fix bbox planar intersection by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/609
* Use precalculated bounding boxes of image-features to speed up image feature query by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/583
* Fix nifti fetch voi by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/611
* Fix ng voi shape by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/615
* Use codecov-actionv4 and use codecov secret by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/616
* maint: unify centroid computation by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/610
* Prevent the intersection of volumes from different spaces by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/620


**Full Changelog**: https://github.com/FZJ-INM1-BDA/siibra-python/compare/v1.0a14...v1.0a19

1.0a14

**Full Changelog**: https://github.com/FZJ-INM1-BDA/siibra-python/compare/v1.0a11...v1.0a14
- Julich Brain 3.1 is now available.

1.0a11

What's Changed
* Test: add cron job to test tutorials regularly by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/585
* Use `nilearn.resample_to_img` for merging fragments by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/572
* fix: python closure is weird by xgui3783 in https://github.com/FZJ-INM1-BDA/siibra-python/pull/587
* fix: add assertion error message by xgui3783 in https://github.com/FZJ-INM1-BDA/siibra-python/pull/588
* test: fast ci if regular branch, full suite if PR to main by xgui3783 in https://github.com/FZJ-INM1-BDA/siibra-python/pull/590
* fix: memory usage when warming the cache by xgui3783 in https://github.com/FZJ-INM1-BDA/siibra-python/pull/589
* Introduce merging Neuroglancer fragments by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/561
* feat: update how related regions are fetched by xgui3783 in https://github.com/FZJ-INM1-BDA/siibra-python/pull/582
* Read freesurfer .annot files as fsaverage mesh labels by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/575
* Reformat `feature.name` and reintorudce `data` and `plot()` for `CompoundFeature`s by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/568
* Test examples as a part of e2e. Create docs on push/PR to main and on publish by AhmetNSimsek in https://github.com/FZJ-INM1-BDA/siibra-python/pull/592


**Full Changelog**: https://github.com/FZJ-INM1-BDA/siibra-python/compare/v1.0a09...v1.0a11

1.0a09

**Full Changelog**: https://github.com/FZJ-INM1-BDA/siibra-python/compare/v1.0a08...v1.0a09

- Fixed `commonns.connected_components` not masking statistical maps
- Fixed assignment of volumes to sparsemaps (which was broken due to 1fccb91b9c2c113a415a961e34d81a14cb9db042)
- Added tests to prevent regression
- Fixed minor bugs and typos

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