Spyking-circus

Latest version: v1.0.6

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0.6.2

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* fix for openephys and new python syntax
* fix in the handling of parameters
* fix a bug on windows with unclosed hdf5 files
* fix a bug during converting with multi CPU on windows
* minor optimization in the fitting procedure
* support for qt5 (and backward compatibility with qt4 as long as phy is using Qt4)

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0.6.1

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* fix for similarities and merged output from the GUIs
* fix for Python 3 and HDF5
* fix for Python 3 and launcher GUI
* fix for maxlag in the merging GUI
* optimization in the merging GUI for pairs suggestion
* addition of an auto_mode for meta merging, to suppress manual curation
* various fixes in the docs
* fix a bug when closing temporary files on windows
* allow spaces in names of probe files
* collect_all should take dead times into account
* patch to read INTAN 2.0 files
* fix in the MATLAB GUI when splitting neurons
* fix in the MATLAB GUI when selecting individual amplitudes

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0.6.0

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* fix an IMPORTANT BUG in the similarities exported for phy/MATLAB, affect the suggestions in the GUI
* improvements in the neuralynx wrapper
* add the possibility to exclude some portions of the recordings from the analysis (see documentation)
* fix a small bug in MS-MPI (Windows only) when shared memory is activated and emtpy arrays are present

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0.5.9

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* The validating step can now accept custom spikes as inputs
* Change the default frequency for filtering to 300Hz instead of 500Hz

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0.5.8

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* fix a bug for int indices in some file wrappers (python 3.xx) (thanks to Ben Acland)
* fix a bug in the preview gui to write threshold
* fix a bug for some paths in Windows (thanks to Albert Miklos)
* add a wrapper for NeuraLynx (.ncs) file format
* fix a bug in the installation of the MATLAB GUI
* fix a bug to see results in MATLAB GUI with only 1 channel
* fix a bug to convert data to phy with only positive peaks
* add builds for python 3.6
* optimizations in file wrappers
* fix a bug for MCS headers in multifiles, if not all with same sizes
* add the possibility (with a flag) to turn off parallel HDF5 if needed
* fix a bug with latest version of HDF5, related to flush issues during clustering

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0.5.7

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* Change the strsplit name in the MATLAB GUI
* Fix a bug in the numpy wrapper
* Fix a bug in the artefact removal (numpy 1.12), thanks to Chris Wilson
* Fixes in the matlab GUI to ease a refitting procedure, thanks to Chris Wilson
* Overlaps are recomputed if size of templates has changed (for refitting)
* Addition of a "second" argument for a better control of the preview mode
* Fix when using the phy GUI and the multi-file mode.
* Add a file wrapper for INTAN (RHD) file format

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