Tibanna-ff

Latest version: v3.4.0

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0.12.7

* envs `fourfront-green` and `fourfront-blue` recognized (both use `webprod` for bucket name)

0.12.6

0.12.4

* Dependency version upgrade
* utils>=0.9.6, tibanna>=0.17.0, Benchmark>=0.5.13
* AWSEM log parsing & workflow custom error support
* input files that are arrays can now skip object key and bucket names (bux fixed)
* `rename` also applied to extra files
* zebra `run_workflow` no longer sleeps.
* md5/fastqc uses mounting (both 4dn/cgap)

0.12.3

RE checker support

0.12.2

* minor logging added

0.12.0

* MADQC support - a QC item can be linked to multiple input files (a single workflow argument with an array of input files) for both 4dn and cgap
* core API now has `info(jobid)` that returns information from dynamoDB.
* workflow run uuid and env are added to dynamoDB at the end of start run.
* Redeployment is required for it to take effect.

tibanna_4dn deploy_core -n update_ffmeta [-s suffix]
tibanna_4dn deploy_core -n start_run [-s suffix]
tibanna_cgap deploy_core -n update_ffmeta [-s suffix]
tibanna_cgap deploy_core -n start_run [-s suffix]

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