* Lambda service error can now be captured and retried by the step function. * Changes require redeployment of tibanna as below:
run the following commands in the order tibanna_4dn deploy_pony tibanna_4dn deploy_core -n <lambda> tibanna_cgap deploy_zebra tibanna_cgap deploy_core -n <lambda>
0.10.4
* `mount` option enabled for input files. * `tibanna>=0.11.0` is required for enabling this feature. * redeployment is required for enabling this feature.
0.10.3
* Workflow `rna-strandedness` handling now implemented on both pony and zebra * In theory it should work with zebra, but cgap portal doesn't have the right schemas, so in practice it would work only with pony. * Problem with `tibanna_4dn plot_metrics` CLI not working now fixed.
0.10.2
* Post-deployment tests are now available using `invoke test --deployment` * The problem of errors not being pushed to the end (and metadata status not getting updated) fixed * Now the dev (test) environment is `fourfron-cgapwolf` for CGAP. * The problem of `tibanna_4dn stats` CLI not working is now fixed.
0.10.1
* The problem of `deploy_pony` and `deploy_zebra` not working without usergroup (`-g`) is now fixed. * Dependency versions loosened.
0.10.0
The following import / entry points are no longer available from the main tibanna repo / tibanna pypi package, but now has moved to this repo and a separate pypi package named `tibanna_ff` (`tibanna-ff`).
The relevant code is the same as in `tibanna` version `0.9.7` which is the version before the split.
tibanna_4dn -h tibanna_cgap -h
import tibanna_4dn import tibanna_cgap import tibanna_ffcommon 4dn/cgap shared components that are not part of unicorn