Tibanna-ff

Latest version: v3.4.0

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0.11.4

* Lambda service error can now be captured and retried by the step function.
* Changes require redeployment of tibanna as below:


run the following commands in the order
tibanna_4dn deploy_pony
tibanna_4dn deploy_core -n <lambda>
tibanna_cgap deploy_zebra
tibanna_cgap deploy_core -n <lambda>

0.10.4

* `mount` option enabled for input files.
* `tibanna>=0.11.0` is required for enabling this feature.
* redeployment is required for enabling this feature.

0.10.3

* Workflow `rna-strandedness` handling now implemented on both pony and zebra
* In theory it should work with zebra, but cgap portal doesn't have the right schemas, so in practice it would work only with pony.
* Problem with `tibanna_4dn plot_metrics` CLI not working now fixed.

0.10.2

* Post-deployment tests are now available using `invoke test --deployment`
* The problem of errors not being pushed to the end (and metadata status not getting updated) fixed
* Now the dev (test) environment is `fourfron-cgapwolf` for CGAP.
* The problem of `tibanna_4dn stats` CLI not working is now fixed.

0.10.1

* The problem of `deploy_pony` and `deploy_zebra` not working without usergroup (`-g`) is now fixed.
* Dependency versions loosened.

0.10.0

The following import / entry points are no longer available from the main tibanna repo / tibanna pypi package, but now has moved to this repo and a separate pypi package named `tibanna_ff` (`tibanna-ff`).

The relevant code is the same as in `tibanna` version `0.9.7` which is the version before the split.


tibanna_4dn -h
tibanna_cgap -h


import tibanna_4dn
import tibanna_cgap
import tibanna_ffcommon 4dn/cgap shared components that are not part of unicorn

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