Xeofs

Bug Fixes

* fix: support new datatree (238) ([`397d15a`](https://github.com/xarray-contrib/xeofs/commit/397d15a5e2a9a766ee624923b48dca296c5cf24f))

Documentation

* docs(changelog): update changelog ([`af13de2`](https://github.com/xarray-contrib/xeofs/commit/af13de2fdfb3e41c5b45db04a6bb4ba2d73f2cf3))

Documentation

* docs(changelog): update changelog ([`a6a32a0`](https://github.com/xarray-contrib/xeofs/commit/a6a32a0b94c7ddd82d028c89321c0a0d3e5c61b2))

Fixes

* fix: isolate required and optional dependencies (237)

Allow more minimal installs by making certain packages optional, namely the backend engines (`h5netcdf, `netcdf4`, and `zarr`) used for saving and loading models, plus `statsmodels` which is used for CPCCA-derived models, and `numba` which is used for GWPCA. ([`a6c05e6`](https://github.com/xarray-contrib/xeofs/commit/a6c05e6117e989da23c18b66d0a908f88860e117))

Chore

* chore(release): 3.0.2 (234) ([`650f2a7`](https://github.com/xarray-contrib/xeofs/commit/650f2a75f727d1dc3847bb5d29249d4303e24907))

Documentation

* docs(changelog): update commit parsers in cliff.toml (233) ([`70025c9`](https://github.com/xarray-contrib/xeofs/commit/70025c9791d9fb9d647889955ab03e93e166fe94))

* docs: fix changelog path (232) ([`dff493b`](https://github.com/xarray-contrib/xeofs/commit/dff493bc50f701af80b3ce0ce34f220ab7ae7469))

* docs(changelog): update changelog ([`6064a6e`](https://github.com/xarray-contrib/xeofs/commit/6064a6effeb3931fea42d800f5189c2a1c8f3ccf))

Fix

* fix: correct whitening in HilbertCPCCA models (230) ([`3ba531c`](https://github.com/xarray-contrib/xeofs/commit/3ba531c62a753feecec15d24ceabba317c7256e2))

* fix(cross): correct saving and loading of CPCCA and Rotator models (225) ([`7cba749`](https://github.com/xarray-contrib/xeofs/commit/7cba749418d0313c7404f2a9991675c058f159dc))

* fix: xarray 2024.09.0 compatility (227) ([`5ed9753`](https://github.com/xarray-contrib/xeofs/commit/5ed9753bc7d8ce349ac75f9043e61c2f6a20677e))

Performance

* perf: speed up rotation by about 20% (228) ([`bcbaa9e`](https://github.com/xarray-contrib/xeofs/commit/bcbaa9effd0515f8d8ee1367e0f94a8cd5c771f4))

* perf: avoid redundant data when saving Rotator models (229) ([`e2525bb`](https://github.com/xarray-contrib/xeofs/commit/e2525bb0f602337589d357860e0f8aeb01a8f58b))

Chore

* chore(release): 3.0.1 (223) ([`c2e15b6`](https://github.com/xarray-contrib/xeofs/commit/c2e15b6ca36246ed512b69e40c2b377f7ee72184))

Documentation

* docs(changelog): update changelog ([`75bbe7a`](https://github.com/xarray-contrib/xeofs/commit/75bbe7af4a9eb072d660c9e331d0284410910e55))

* docs: add migration guide (217) ([`dfaab53`](https://github.com/xarray-contrib/xeofs/commit/dfaab53734f33042d6762aba4799afa5479585c4))

* docs(changelog): update changelog ([`800e608`](https://github.com/xarray-contrib/xeofs/commit/800e6086d3f7032f8e9917fd3c4ff2f118f9e84e))

Fix

* fix(cross): compute total squared covariance in PC space (221) ([`2dd3e86`](https://github.com/xarray-contrib/xeofs/commit/2dd3e86d1b41416346a31c6dffd261834990426b))

* fix(cross): fix data augmentation in Hilbert cross-set models (222) ([`960f744`](https://github.com/xarray-contrib/xeofs/commit/960f74429a01d614bd9289d762550128206330a0))

Breaking

* refactor!: reorganize methods into new namespaces (210) ([`675983f`](https://github.com/xarray-contrib/xeofs/commit/675983fbb030380e6bde5ce7ede02346d8c9debe))

* feat!: remove verbose parameter (205) ([`2fd90dd`](https://github.com/xarray-contrib/xeofs/commit/2fd90dd06dd2ca919c21fed6eb53a14aee61a5bb))

* feat!: Support for Complex and Hilbert models (202) ([`77ac921`](https://github.com/xarray-contrib/xeofs/commit/77ac921cbbbec8db91143d40a144ef65eab1098c))

Chore

* chore: release v3.0.0 (216) ([`87e584e`](https://github.com/xarray-contrib/xeofs/commit/87e584ec8003dcc470ca6df4ae3b74a717266c96))

* chore: merge branch &39;main&39; into develop ([`8acc4ae`](https://github.com/xarray-contrib/xeofs/commit/8acc4ae213ce2d91a3ce78fb07dabfff180e0f9f))

Documentation

* docs(changelog): update changelog ([`a4e1be2`](https://github.com/xarray-contrib/xeofs/commit/a4e1be220ed572e6bd8490a0e1a7f4e1ad6ac34d))

* docs(readme): fix broken badges (204) ([`72e8c60`](https://github.com/xarray-contrib/xeofs/commit/72e8c60941bd00a091e5d6d27635622a26aa9bcf))

* docs(changelog): update changelog ([`be6664d`](https://github.com/xarray-contrib/xeofs/commit/be6664d08c49e5f588bc44bcd8f1852d4bea2c43))

Feature

* feat: add POP analysis (215) ([`5a0cc95`](https://github.com/xarray-contrib/xeofs/commit/5a0cc95346963a73b1a44f61ce1d2e097867edbd))

* feat: add Redundancy Analysis (212) ([`76c4605`](https://github.com/xarray-contrib/xeofs/commit/76c4605917213af33cd030b730589f5c1b4daa95))

* feat: add CCA as cross-set analysis (211) ([`fcba987`](https://github.com/xarray-contrib/xeofs/commit/fcba987d513674bccdf5b25226eb2a5c9a9d83e2))

* feat: change default value of parameter `normalized` (207) ([`278d2ee`](https://github.com/xarray-contrib/xeofs/commit/278d2ee28e9366631537c78de5a4778ae6c76b0d))

* feat: add Continuum Power CCA (196)

Co-authored-by: Sam Levang <slevangsalientpredictions.com> ([`de9eaa7`](https://github.com/xarray-contrib/xeofs/commit/de9eaa7819c9237d2b8011e6940baa6511d1cd51))

Fix

* fix: alpha paramter in Hilbert CCA (213) ([`dba4478`](https://github.com/xarray-contrib/xeofs/commit/dba44787e6cb25c61301cdc7031e0acab9c72854))

* fix: standardize variable names to `X` and `Y` for consistency (206) ([`a1ebe58`](https://github.com/xarray-contrib/xeofs/commit/a1ebe582ef8c4714f864d67c3ab5d64ecd2f596b))

Refactor

* refactor(typing): use built-in types for annotations (208) ([`7505350`](https://github.com/xarray-contrib/xeofs/commit/75053507a2a4128d25e2c46fe24ef0f85a07364a))

Chore

* chore: add deprecation warning for verbose parameter (200) ([`f2f3354`](https://github.com/xarray-contrib/xeofs/commit/f2f335415aa49d575ce08e5a983a466b076fa0c0))

* chore: add deprecation warning for verbose parameter ([`87b23f9`](https://github.com/xarray-contrib/xeofs/commit/87b23f9d8dfc219730dda22800c5ec98206dc9d3))

* chore: updating internal code structure (195) ([`00d5fb7`](https://github.com/xarray-contrib/xeofs/commit/00d5fb7dcd176aa6eaf274805ebfc29eb937c8b6))

* chore: merge main into develop ([`4e683e6`](https://github.com/xarray-contrib/xeofs/commit/4e683e644be0975e3f2e388703a5dd88484da674))

* chore: update Github Issue templates (172) ([`998774f`](https://github.com/xarray-contrib/xeofs/commit/998774fe50259ec2341aa1b21da51a9f077df22c))

Ci

* ci(changelog): remove old Github Action

Not needed anymore since we&39;re using git-cliff. ([`45b513e`](https://github.com/xarray-contrib/xeofs/commit/45b513e57e3f32aa8498b94f5b5e4c84ac61ecfe))

* ci: update git-cliff Github Action

Run git-cliff after the release to ensure that the latest changes are incroporated; update Github Action to new v3 according to the official Github Action readme (https://github.com/orhun/git-cliff-action?tab=readme-ov-file#committing-the-changelog) ([`f8b3305`](https://github.com/xarray-contrib/xeofs/commit/f8b33053bd2c2bd09808887b890a1d2fab611eb3))

Documentation

* docs(changelog): update changelog ([`8eed958`](https://github.com/xarray-contrib/xeofs/commit/8eed958bbc23dc2d3a5ae8195f02e1b8efb813e5))

* docs(changelog): update changelog ([`280bd43`](https://github.com/xarray-contrib/xeofs/commit/280bd430383ae5fecc47275f1964945b1bd5479b))

* docs(changelog): move log to documentation (199) ([`c9de931`](https://github.com/xarray-contrib/xeofs/commit/c9de931327faae972747e3b0d3fbfded4c3b9a91))

* docs: fix typo ([`bd7f429`](https://github.com/xarray-contrib/xeofs/commit/bd7f4297ad9005bc05025fe2edfc9469d1f2e54e))

* docs: add icons as unicode ([`b8586aa`](https://github.com/xarray-contrib/xeofs/commit/b8586aa6376a1ddfa490c43576548cedfddc8c06))

* docs: remove icons from changelog ([`153b777`](https://github.com/xarray-contrib/xeofs/commit/153b77772957f75b10bbe1685496f4db0722f423))

* docs: add CHANGELOG into documentation ([`9188ef2`](https://github.com/xarray-contrib/xeofs/commit/9188ef280c174d7dc14df5e7282a2efb01567771))

* docs: add myst-parser package

myst-parser allows to include markdown files into the shinx documentation which requires rst files. ([`24d7692`](https://github.com/xarray-contrib/xeofs/commit/24d7692149085c453d19b6dc3da3f22697cc5c31))

* docs: move CHANGELOG to docs directory ([`541b749`](https://github.com/xarray-contrib/xeofs/commit/541b749d73ac6d8d2bd6f12ddd25419af9b29787))

* docs(decomposer): improve error messages (194) ([`9d34060`](https://github.com/xarray-contrib/xeofs/commit/9d34060617a45c60b02bf504e38d7b202285ccfc))

* docs: add logo for social preview (190) ([`ae6a900`](https://github.com/xarray-contrib/xeofs/commit/ae6a90083193613571e3955e6bd419c490111ff4))

* docs: add favicon (182) ([`33e5bbb`](https://github.com/xarray-contrib/xeofs/commit/33e5bbb11e847d944424de410afef04d642ac2b6))

* docs: update color design (181) ([`25598a1`](https://github.com/xarray-contrib/xeofs/commit/25598a1fc23e41560e9d85327f7c52c0420825f4))

* docs: reorganize documentation (171) ([`aa28770`](https://github.com/xarray-contrib/xeofs/commit/aa287706f590c7afe7eeb6d51c30d64b4d285cc0))

Fix

* fix: add deprecation warning for `Complex` model classes (201) ([`6bac230`](https://github.com/xarray-contrib/xeofs/commit/6bac230423b33169d6e32adaf3e885277d83773b))

Refactor

* refactor(datacontainer): parameter list serialization (193) ([`7b9764d`](https://github.com/xarray-contrib/xeofs/commit/7b9764d65c1e0900bfd4d4d2b744e8d69bb2831a))

* refactor(sanitizer): reuse utility function to test input types (192) ([`db03601`](https://github.com/xarray-contrib/xeofs/commit/db0360188fcaac8cd9df57d77f3105ab9edd77d8))

* refactor: merge branch &39;main&39; into develop ([`1f38f48`](https://github.com/xarray-contrib/xeofs/commit/1f38f48043a42ddbadcb4ac4bec9168b39ba4f43))

* refactor(whitener): add more flexibility (191) ([`65ab502`](https://github.com/xarray-contrib/xeofs/commit/65ab5028461145441424ced7098f3cc4b544cc2c))

* refactor: add `PCAPreprocessor` class (186) ([`9003182`](https://github.com/xarray-contrib/xeofs/commit/90031824a27f406c96ca26a86b7f941edefaf815))

* refactor(whitener): add Whitener to whiten a 2D matrix (185) ([`a6b61b3`](https://github.com/xarray-contrib/xeofs/commit/a6b61b31ba14a67e1f3d6fd52ca5625ad362b1cc))

* refactor(decomposer): allow truncated SVD based on variance (184) ([`5973c41`](https://github.com/xarray-contrib/xeofs/commit/5973c41e7acab3c999747dcc89503f260ad68451))

* refactor(test): clean preprocessing test suite (180) ([`95e216e`](https://github.com/xarray-contrib/xeofs/commit/95e216ea35206f489de4e60dc5d1873f82ea9e8c))