Allotropy

Latest version: v0.1.82

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0.1.10

Added

- Plate Reader - add data system document to plate reader schema

Changed

- AppBio QuantStudio RT-PCR - redefine reporter dye setting for genotyping experiments (102)
- Global - update TimeStampParser.parse() to raise for invalid input

0.1.9

Added

- AppBio QuantStudio RT-PCR - add missing example outputs for tests
- Cell Counting - add cell-counting/REC/2023/09 schema, with additions to support existing use cases

Fixed

- Plate Reader - fix plate-reader schema to be compatible with current supported adapters and change REC -> BENCHLING

0.1.8

Added

- Internal - allow lines reader to accept or infer encoding

Fixed

- Global - use fuzzy=True for timestamp parsing to handle non-standard cases (e.g. mixing 24h time and AM/PM)

0.1.7

Added

- Internal - add governance document
- Plate Reader - add plate-reader/REC/2023/09 schema (not in use by parsers yet)

Fixed

Changed

- Cell Counting - change the schema name of cell-counting/BENCHLING/2023/09 to match Allotrope
- Roche Cedex HiRes - rename to PerkinElmerEnvisionParser and RocheCedexBiohtParser for consistency
- Global - generic Exceptions to AllotropyErrors

0.1.6

Added

- AppBio QuantStudio RT-PCR - test for broken calculated document structure

Fixed

- AppBio QuantStudio RT-PCR - fix bug in result caching

Changed

- AppBio QuantStudio RT-PCR - allow block type to have plate well count in any position
- Internal - replace datetime.timezone with ZoneInfo in TimestampParser
- Internal - implement CsvReader as child of LinesReader

0.1.5

Added

- AppBio AbsoluteQ - initial implementation

Fixed

- AppBio QuantStudio RT-PCR - redefine calculated data documents references as required
- dPCR - update dPCR schema "experiment type" enum to have correct values

Changed

- dPCR - make "fluorescence intensity threshold setting" optional in the dPCR schema
- Internal - update the "calculated datum" property on the calculated data documents to allow different units

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