Bactopia

Latest version: v1.5.0

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- Fixed `bactopia-search` not including header name in accessions.txt
- Added `--hybrid` and `--short-polish` to `bactopia-prepare`

- Fixed `bactopia-summary` handling of empty searches

- Fixed `bactopia-download` not building prokka and bakta conda envs

- Fixed `bactopia-summary` working with new output structure

- Fixed `bactopia-search` using missing columns in the query
- dropped pysradb dependency

- Added `bactopia-datasets` to download optional datasets outside of Nextflow
- consistently use `--bactopia-path` across sub-commands

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