Gnomonicus

Latest version: v2.5.7

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2.1.4

What's Changed
* Fix to use `None` values if vcf idx cannot be found (36) by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/39
* fix so predictions.csv still written even when no mutations detected by philipwfowler in https://github.com/oxfordmmm/gnomonicus/pull/40
* Fix to ensure that multis aren't erroneously duplicated by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/38

New Contributors
* philipwfowler made their first contribution in https://github.com/oxfordmmm/gnomonicus/pull/40

**Full Changelog**: https://github.com/oxfordmmm/gnomonicus/compare/v2.1.3...v2.1.4

2.1.3

Fixes for `gbkToPkl` to ensure functionality
**Full Changelog**: https://github.com/oxfordmmm/gnomonicus/compare/v2.1.2...v2.1.3

2.1.2

Bump `gumpy` version to ensure bug fix

2.1.1

What's Changed
* Add version flag by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/29
* Added pushing to OCR as well as dockerhub for GPAS by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/30
* Added s3fs req by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/32
* `gene_name` --> `gene` in variants.csv for 33 by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/34
* Added error handling to temporarily appease oxfordmmm/gumpy24 by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/35


**Full Changelog**: https://github.com/oxfordmmm/gnomonicus/compare/v2.1.0...v2.1.1

2.1.0

What's Changed
* Fix pickled genome issue by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/17
* Bug fixes by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/20
* Ensure all values are properly converted to null by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/21
* Fix for 22 by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/24
* Fix for minor indel nc changes by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/25


**Full Changelog**: https://github.com/oxfordmmm/gnomonicus/compare/v2.0.0...v2.1.0

2.0.0

What's Changed
* Large deletions by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/12
* Cicd docs by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/14
* Minor aa fixes by JeremyWesthead in https://github.com/oxfordmmm/gnomonicus/pull/15


**Full Changelog**: https://github.com/oxfordmmm/gnomonicus/compare/v1.1.3...v2.0.0

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