Instrain

Latest version: v1.9.0

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0.5.4

- Bugfix with regards to how unmaskedBreadth and ANI were calculated in an mm-based way

0.5.3

- Add the script "quickProfile"

0.5.2

- Shrink base-wise vectors before saving
- Use compression on hdf5 files
- Optimize multiprocessing
- Add the ability to provide a list of .fasta files to consider

0.5.1

- Improvements to logging of multiprocessing; done by default now

0.5.0

- Make _get_paired_reads_ much more RAM efficient
- Store clonT and covT in hd5 format, which prevents that final RAM spike
- Store clonality as float32 instead of float64
- Debug now stores useful RAM information

0.4.11

- Make _clonT_to_table_ much more RAM efficient
- Another bugFix for ReadComparer

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