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4.13.2

Bai Shi (1):
COMP: To fix compilation error of "cannot dynamic_cast 'x'

Bradley Lowekamp blowekamp (10):
BUG: Support ITK transform files with corrected group names
BUG: Update SCIOFIO to ITKv4.13 branch
BUG: Handle boundary case with max metric
BUG: Remove static member function variable
BUG: Synchronize BSpline MeshDomain parameters from fixed params
COMP: Address CMake policy warnings in ThirdParty libraries
ENH: Update AzurePipelines configuration from master
ENH: Explicitly set the XCode version used in Azure
COMP: Use CMP0048 new for wrapping
COMP: Set CMP0048 to new in ITK (Remote) Modules

Dženan Zukić dzenanz (2):
STYLE: fixing 'No new line at the end of file'
ENH: ITKv5_CONST macro for VerifyPreconditions() and VerifyInputInformation()

Francois Budin fbudin69500 (1):
BUG: Disable Python tests if `ITK_BUILD_DEFAULT_MODULES` is OFF

GDCM Upstream malaterre (3):
GDCM 2019-02-07 (8e1cfd05)
GDCM 2018-10-23 (2e701ed7)
GDCM 2019-02-08 (815caa81)

Isaiah Norton ihnorton (2):
BUG: prevent segfault when transform reader fails to load .mat
BUG: don't quote argument to URL_HASH for FFTW

Matthew McCormick thewtex (9):
BUG: Use manylinux to build CastXML linux executable
COMP: Address empty _FILE_OFFSET_BITS in tif_config.h with MinGW64
BUG: Remove duplicate ITK version number
ENH: Add Azure Pipelines configuration
ENH: Add regression test for reading legacy multi-frame DICOM
COMP: Set CMP0083 for PIE flags
ENH: Bump CMakeLists.txt version to 4.13.2
ENH: Add missing SHA512 content link
ENH: Explicitly use Python 3.7 in Azure builds

Niels Dekker N-Dekker (2):
COMP: Fixed GDCM OpenJPEG name mangling
PERF: Remove SystemInformation data from ResourceProbe, fix issue 350

4.13.1

Bradley Lowekamp (10):
COMP: Use anonymous namespace for internal linkage
COMP: Update SimpleITKFilters for dependency issues
BUG: Add missing extensions to ImageIO
BUG: Add specification of OutputImage Type for TobogganImageFilter
BUG: Prevent concurrent read/write in output image
BUG: Handle case where output image is zero sized
COMP: Fix overflow in floating-point conversion warning
ENH: TileImageFilter learns to use VectorImages
ENH: Update SimpleITKFilters remote modules
BUG: Use pip to install cmake for release

Francois Budin (2):
BUG: Initializes CMAKE_DEBUG_POSTFIX to be empty
BUG: Improvements to ITK NumPyBridge

Jean-Christophe Fillion-Robin (1):
BUG: Prevent gdcm "missing implementation" error on macOS

Jon Haitz Legarreta Gorroño (1):
ENH: Add Python wrap file to itk::MultiResolutionPDEDeforableRegistration.

Martino Pilia (1):
BUG: fix itkFormatWarning in Python wrapping

Matthew McCormick (13):
ENH: Add wrapping for BSplineTransformInitializer
COMP: Do not use absolute path to TestBigEndian.cmake in GDCM
COMP: Enable pthreads shim with Emscripten
BUG: Allow module examples to be enabled when built externally
ENH: Ensure external module examples get added to current build tree
COMP: Work around RegionGrow2DTest compiler error on ppc64le
BUG: Wrap long long instead of long
COMP: Detect Linux in itkMemoryUsageObserver.h on Alpine Linux
COMP: Wrap MultiResolutionPDEDeformableRegistration for Pyramid filter types
BUG: Migrate midas3.kitware.com to data.kitware.com
BUG: Correct Windows and macOS CastXML hashes
COMP: Set CMake project command VERSION
COMP: Bump CastXML for Visual Studio 2017 support

Niels Dekker (1):
COMP: Worked around endless VS2015 Release compilation on Math::Floor

Pablo Hernandez-Cerdan (2):
COMP: Fix VNL to compile with gcc8.
STYLE: Mark CMAKE_DEBUG_POSTFIX as advanced.

Sean McBride (5):
STYLE: arranged/alphabetized things to make subsequent changes reviewable
COMP: Fixed some missing name mangling of libTIFF symbols
BUG: fixed crash on macOS under guardmalloc from RunOSCheck()
COMP: Mangle HDF5 symbol names
COMP: fix warning about implicit double to bool conversion

4.13.0

------------------------------------------------

Adrien Bailly (1) adrien.bailly :
ENH: add wrapping for MultiResolutionIterationEvent and other missing event

Beatriz Paniagua (2) bpaniagua :
ENH: Updating pygccxml version
ENH: Updating libPNG to track upstream libpng16 branch

Brad King (2) brad.king :
ENH: Port GDCM update script to update-third-party.bash
ENH: Update GDCM import script for changes in upstream content

Bradley Lowekamp (93) blowekamp :
DOC: fix spelling transfrom->transform
ENH: Improve Not functor and filter to follow other logic functors
ENH: Separate functors from filters in header by operator groups
DOC: Fix spelling mistakes from SimpleITK JSON, from spellintian
ENH: making available GoogleTest for testing in ITK
COMP: Address missing ITK_TEMPLATE_EXPORT definition
COMP: Use single line for string argument, by-pass multi-line issues
COMP: Revert to CMake 2 compatible line comment
ENH: Move rank filters out of review
BUG: Use const for pipeline inputs and state functions
ENH: Explicitly warn and deprecate negative pixel spacing.
BUG: Modify google test to define _VARIADIC_MAX=10
COMP: Fix using system GoogleTest with a compiled system library
ENH: Add SliceImageFilter
COMP: Use itk::Math::abs over vnl_math_abs
ENH: Add GetProbe method to collectors base.
BUG: Add missing exports for GTest::* targets
BUG: Fix computation of central moments for shape label map
ENH: Adding operator functors from SimpleITK
ENH: Choose efficient central moment computation for run
BUG: Add missing OrientedBoundingBox option
DOC: recommend using separate instances
BUG: Manually set seed for ParticleSwarmOptimzerTest
BUG: Fix computation of oriented bounding box
BUG: shape label object elongation incorrectly zero
ENH: Add GTest utilities for ITK
ENH: adding explicit testing of computed label shape attributes
BUG: Propagate make program to KWStyle ExternalProject
BUG: Error only when unknown module is enabled.
DOC: Document behaviors of ChangeLabelLabelMapFilter
BUG: Document and assert improper usage of transform methods.
COMP: Enable hidden visibility property with GoogleTest static libraries
DOC: Doxygen namespace tag must be full namespace
BUG: Fix computation for Jacobian local vector
BUG: Cast to PrintType for MaskLabel variable printing
ENH: Update FixedPointInverseDisplacementField remote module
BUG: Error only when unknown module is enabled.
BUG: Fix computation of central moments for shape label map
BUG: shape label object elongation incorrectly zero
BUG: Fix computation of oriented bounding box
BUG: Add missing OrientedBoundingBox option
ENH: Update FixedPointInverseDisplacementField remote module
ENH: Only remove hidden visibility for C file with CMake<3
BUG: Print missing Seeds parameter and values used for Upper/Lower
ENH: Remove unneeded m_Upper and m_Lower ivars
ENH: Prefer raw pointers for pipelined owned objects
ENH: Update to use CircleCI 2.0
ENH: Enable MINC IO by default
ENH: Move advance Demons registration filters out of review
BUG: Fix CircleCI command to upload test results
ENH: Test SliceBySlice with non-zero index
BUG: Use same origin for internal image as input image
BUG: Remove duplicate code from local commit
COMP: Remove MINC library level exports
ENH: Add ProcessObject::AddOptionalInputName and more named inputs
ENH: Make more use of AddOptionalInputName
BUG: Use input macros for const correct pipeline inputs
ENH: Remove input name when renamed and add tests
BUG: Correct OBB names in GetAttributeFromName
ENH: Add ShapeLabelObject::GetRegion method
ENH: Hide MINC data in MINCIImageIO interface
BUG: Remove newly added warning in ProcessObject AddRequiredInput
BUG: Apply constant function specifier
BUG: Fix marking of required inputs for GPU PDE registration
BUG: Add missing getter method for PDE InitialDisplacementField
ENH: Use Input macros for set/get GPU PDE inputs
ENH: Move private GE format headers to src
ENH: CircleCI use ccache and cache external data
ENH: Extract reusable code into a copy image information functor
ENH: Change Cast parent class to InPlaceImageFilter
BUG: Add search paths for GoogleTest as source code on system
BUG: Update BinaryImageToLabelMapFilter::m_NumberOfLabels
COMP: Remove shadowing typedef
ENH: Updating remote module TextureFeatures to 3.0.0
COMP: Use integer suffix for long long types
BUG: Disable checking of OBB origin
PERF: Use initialized global variable for default number of threads
ENH: Add remote mote SimpleITKFilters
ENH: Add type for MultiThreader used by the ProcessObject
BUG: Don't use void pointer
BUG: Fix LBFGS2 iteration count and iterface
BUG: Use AutoPtr for initialization based resource acquisition
BUG: Fix factory registration during static initialization
BUG: Fix const correctness of GetDisplacementField, use named input
STYLE: Use LineSearch conventions
BUG: Relax timeout to 60 seconds for itkSimpleFastMutexLockTest
COMP: Mark itkTimeVaryingBSplineVelocityFieldImageRegistrationTest long
COMP: Address linking error using operator<<
COMP: Must define target before adding compile definitions
COMP: Issue a CMake warning if ITKV3_COMPATIBILITY
COMP: Enable CMP0063, support setting visibility properties
COMP: Enable CMP0063, support setting visibility properties
COMP: Enable CMP0063, support setting visibility properties

David Kügler (1) david.kuegler :
BUG: better support for OBJ mesh format

Dženan Zukić (21) dzenanz :
ENH: adding an example and improving tests
ENH: support VCPKG
ENH: rewriting ThreadPool and enabling it by default
ENH: docs and compiler fix for ThreadPool, improvements of itkBarrierTest
ENH: turning off thread pool by default for now
STYLE: minor fix in debug mode and clearer code intent by using macros
STYLE: warn users of the DeformableSimplexMesh3DFilter's limitations
ENH: Addition of type long long and unsigned long long for images
STYLE: VTK Mesh IO code simplification
COMP: fixing warnings
BUG: a call to SetGlobalDefaultNumberOfThreads was not respected
BUG: LONGLONG was not handled by DCMTKImageIO
BUG: PNG IO: return false instead of crashing in CanReadFile
COMP: fix a warning
BUG: ThreadPool hangs on Windows when ITK is compiled as DLLs
BUG: tests writing to the same file randomly fail during parallel invocation
COMP: fixing 2 compile errors on some compilers
ENH: adding JSON format report to resource probe
BUG: NIFTI crashing when requested region is set
BUG: colliding file names caused spurious test failures
BUG: fix two rename mistakes introduced in previous patch

Edwin Bennink (1) ebennink :
BUG: Fixed cylinder bbox, fixed and enhanced IsInside func

Floris Berendsen (2):
COMP: add symbol name mangling for niftilib in ITK
COMP: add symbol name mangling for niftilib in ITK

Francois Budin (54) fbudin :
ENH: Bump ITK version to 4.13.0.
BUG: Update external data content links
ENH: Add cleanup option to content synchronization script
BUG: Used ITK_HAVE_FEENABLEEXCEPT instead of ITK_HAS_FEENABLEEXCEPT
BUG: Used ITK_HAVE_FEENABLEEXCEPT instead of ITK_HAS_FEENABLEEXCEPT
Revert "Merge branch 'feenableexcept-musl-for-release' into release"
Merge branch 'upstream-metaio' into update_metaIO
ENH: Bump CMakeLists.txt version to 4.12.1.
COMP: Remove -fvisibility-inlines-hidden warning with CMake 2.8.12
BUG: Remove VNL view from array functions and rename wrong variable
BUG: itkSimilarity2DTransform was not reporting singular matrices
ENH: Add test to verify ITK-3553 fixes
BUG: itkTestingComparisonImageFilter should derive from itkImageToImageFilter
BUG: Update tests to use ImageToImage compare image filter
ENH: Add options to itkTestDriver and itkTestingComparisonImageFilter
ENH: Adds MINC image IO wrapping
ENH: Replace ICONV with ICU to compile DCMTK
DOC: Document that workaround MSVC 2017 optimization bug has been corrected
BUG: sha512 file must exist before complaining that it hasn't been updated
BUG: Missing files for DCMTK ImageOrientation test
BUG: itkgdcmopenjp2 was not exported in the build tree in GDCM
BUG: Duplicate SetInput()/GetInput() in itkTestingComparisonImageFilter
BUG: ICU_ARGS CMake variable should be declared CACHE
BUG: Typo in CMake variable name
BUG: Build DMCTK on Windows
BUG: Support color images (RGB/RGBA) with DCMTK
ENH: Add test for colored images loaded with DCMTK
BUG: ICU is always compiled statically
ENH: Update DCMTK build instructions for Windows
ENH: Adds itk_module_examples() macro
COMP: Bump CMake required version to 2.8.12
ENH: Simplify itk-module-init.cmake for DCMTK
BUG: Inconsistent image information between result and baseline
BUG: Python docstrings were not generated anymore
ENH: Add __call__() function in Python itkTemplate objects
BUG: DMCTK configuration with ICU on Windows was only correct for VS2017
BUG: Remove man page generation that is not necessary anymore
ENH: Improving factory registration
ENH: Adding factory components
ENH: Update remote modules using FACTORY_NAMES
BUG: Add previously removed function __getattr__() in `itkTemplate.py`
BUG: Synchronize factories across modules in Python
ENH: Allow RAW itk-module as shared library
BUG: ITK_WRAP_DOC should not be saved in ITKConfig.cmake
BUG: Remove unicode characters that stop python docstring generation
BUG: `doxy2swig.py` failed with Python3
BUG: Allow compilation of VNL with MSVC<1600
BUG: \default is not a doxygen keyword
BUG: Better control of GDCM symbols with CMAKE_WINDOWS_EXPORT_ALL_SYMBOLS
ENH: github comparison instead of shortlog in `UpdateThirdPartyFromUpstream.sh`
BUG: DCMTK CMakeLists.txt detects MSVC versions in [1910,1919] as MSVC2017
BUG: itkObjectFactoryBase was making ITK initialization crash
BUG: itkSpatialObject.cxx was not respecting ITK_FUTURE_LEGACY_REMOVE
BUG: Create IO Meta modules at module loading time

GCC-XML Upstream (1):
ENH: pygccxml v1.9.0 (reduced)

GDCM Upstream (4):
GDCM 2017-09-15 (87e3c363)
GDCM 2017-10-13 (46919364)
GDCM 2017-11-09 (af81d444)
GDCM 2017-11-23 (4c51c343)

Google double-conversion Maintainers (1):
ENH: Google double-conversion (reduced)

GoogleTest Upstream (2):
googletest 2016-07-14 (a3ac2d7f)
GoogleTest 2017-12-11 (0fe96607)

Hans Johnson (7) hjmjohnson :
BUG: vnl_fft_1d lacks sufficient numerical stability
COMP: Clang compiler regression
ENH: Synchronized with cmake version of file
BUG: Respect ITK_FUTURE_LEGACY_REMOVE
COMP: Missing ITK_OVERRIDE for BinaryPruningIMageFilter
BUG: Fix non-windows cmake configuration regression
COMP: Fix VariationalRegistration for future const GetMacro support

Jean-Baptiste VIMORT (2) jbvimort :
ENH: Automatic enabling of the -fPIC flag for external modules
ENH: Supression of GDCM's linking to CoreFoundation

Jean-Christophe Fillion-Robin (6) jcfr :
ENH: Support installing each module python wrapping independently
COMP: Update KWsys to set MACOSX_RPATH property based on CMAKE_MACOSX_RPATH
COMP: Update MINC to set MACOSX_RPATH property based on CMAKE_MACOSX_RPATH
COMP: ITKModuleExternal: Reset targets file
BUG: Fix hook clone
COMP: UseITK: Fix configure error due to different subproject requirements

Jon Haitz Legarreta Gorroño (37) jhlegarreta :
ENH: Improve coverage for v3 compatibility image arithm filters.
DOC: Fix typo in 'exception'.
STYLE: Improve the itk::FastMarchingImageFilterBase class style.
STYLE: Improve itkApproximageSignedDistanceMapImageFilterTest style.
ENH: Check for input/output objects with an assertion.
BUG: Fix const casting compiler errors.
DOC: Update old file headers/copyright notices.
STYLE: Improve the itkSmoothingRecursiveGaussiaImageFilter style.
ENH: Improve coverage for itkSmoothingRecursiveGaussianImageFilter.
BUG: Fix links to NOTICE and LICENSE files in `README.md`.
STYLE: Conform (partially) to ITK coding style.
DOC: Add missing links to Markdown file cross-refs.
ENH: Add a Pull Request template.
DOC: Remove extension to Markdown cross-ref link text.
STYLE: Change SubtractConstantFromImageFilterTest name.
BUG: Add missing input image iterator declaration.
BUG: Fix Superclass names in V3Compatibility tests.
DOC: Fix wrong comments in V3Compatibility tests.
DOC: Correct the preferred class names in ITKv4.
COMP: Fix valgrind-detected uninitialized members.
ENH: Improve coverage for itkWarpHarmonicEnergyCalculator.
ENH: Bump lastest version of remote repository.
ENH: Display error message in Iterator classes' wrapping.
DOC: Add links to NOTICE and LICENSE files in README.
DOC: Rework the contributing files.
DOC: Document how to upload binary data in a Markdown file.
DOC: Transition ThirdParty top-level README files to Markdown.
DOC: Add third party project updating documentation markdown file.
DOC: Document the release process in a Markdown file.
DOC: Transition Utilities/Maintenance/README Markdown.
DOC: Remove Documentation/Style.pdf file.
DOC: Redirect the "Submit a patch" link to `CONTRIBUTING.md`.
DOC: Mention the ITK full name in `README.md`.
DOC: Fix broken links and oversights in `CONTRIBUTING.md`.
DOC: Add a `GitHelp.md` resource to Documentation.
DOC: Make the ITK long name be consistent in .md files.
DOC: Create ISSUE_TEMPLATE.md

KWSys Upstream (1):
KWSys 2017-10-17 (fc4d55ba)

Laura Pascal (2):
ENH: Update version of DCMTK to 3.6.1_20170529
ENH: Update the DoubleConversion library upstream update script.

Mathieu Malaterre (4) mathieu.malaterre :
ENH: Explicit set the precision when printing double
ENH: Use double floating point API for MetaImage
ENH: Define a global default double precision for MetaImage
ENH: Enforce data truncation for legacy tests

Matthew McCormick (52) matt.mccormick :
ENH: Add install rules for External Module Python package
COMP: Do not wrap std::_Deque_alloc
ENH: Wrap RegionOfInterestFilter for VectorImage's
COMP: Disable CoreFoundation calls
ENH: Execute the merge when updating third party subtrees
ENH: Allow custom repo and branch for MetaIO subtree updates
COMP: Specify AR to PCRE build on macOS
BUG: Mark GoogleTest CMake options as advanced
COMP: Address LBFGS2Optimizerv4 doxygen warnings
BUG: ITKIOGE has a public dependency on ITKIOIPL
COMP: Bump KWStyle to latest master
ENH: Add TextureFeatures remote module
COMP: Detect the presence of mallinfo
COMP: IsNull() capitalization in LevelSetEquationAdvectionTerm
ENH: Wrap FloatingPointExceptions
COMP: Use GDCM_HAVE_BYTESWAP_H
COMP: Fail early when byteswap functions are not available
COMP: Detect the presence of feenableexcept
BUG: Use itkGetConstObjectMacro for LogBiasFieldControlPointLattice
COMP: Detect the presence of feenableexcept
COMP: Use GDCM_HAVE_BYTESWAP_H
COMP: Fix AnisotropicDiffusionLBR example build
BUG: Correct GPUMeanImageFilter Superclass
BUG: Remove debug code from GPUMeanImageFilter
BUG: Do not use static_cast, SmartPointer in GPUImage::GetGPUDataManager
BUG: Remove debug code in itkGPUImage.hxx
COMP: Do not call vector.data() in ITKIOBruker
ENH: Bump CMakeLists.txt version to 4.12.1
DOC: Format the README in markdown syntax
DOC: Enable offline Doxygen support
BUG: ITKIOMINC DEPENDS on ITKMINC
BUG: Update Bruker IO wrapping after migration from ITKReview
COMP: Update MorphologicalContourInterpolation to 2017-09-22
DOC: Do not pre-cache Doxygen php files
DOC: Expose RayCastInterpolateImageFunction members in Doxygen
BUG: RayCastInterpolateImageFunciton physical space issues
COMP: Overloaded - operator ambiguous in RayCastInterpolateImageFunction
BUG: Add missing template export for GradientAnisotropicDiffusionImageFilter
ENH: Wrap {Correlation,Demons,JointHistogramMI} Metricv4
ENH: Add Python wrapping for ITKIOMesh
BUG: Hide HDF5 CMake options from main configuration
BUG: Add DCMTK external project dependency after ExternalProject_Add
COMP: Bump CastXML to 2017-11-06 master
BUG: Fix hooks clone when ITK is a submodule
BUG: Remove duplicate entries of ITK_WRAP_PYTHON_LIBRARY_IMPORTS
DOC: Remove broken HoughTransform2DCircles wiki examples link
DOC: NeighborhoodIterator documentation formatting improvements
COMP: Do not use export macro in vnl_amoeba default_verbose
COMP: HoughTransform2DCirclesImageFilter lines too long for Software Guide
BUG: Reset LIST_OF_IMAGEIO_FORMATS in UseITK.cmake
COMP: Do not wrap itk::ObjectFactoryBasePrivate
DOC: Update Python package release process

MetaIO Maintainers (5):
MetaIO 2017-07-20 (92caf34d)
MetaIO 2017-08-17 (3e1cb552)
MetaIO 2017-10-04 (55395e3d)
MetaIO 2017-08-31 (5f935e1b)
MetaIO 2017-12-04 (02a2e22e)

Niels Dekker (23) Niels_Dekker :
COMP: Fixed <nifti1_io.h> leak into user code
STYLE: Replaced NiftiImageHolder by AutoPointer
COMP: Fixed "gifti_io.h" leak into user code
COMP: Fixed "Ge5xHdr.h" leak into user code
PERF: Break out of loop as soon as requested number of circles is found
STYLE: Removed useless (or obsolete) local bool, 'found'.
PERF: Avoid redundant search in GetCircles(n)
PERF: GetCircles now calls Graft, instead of copying pixels from GetOutput(0)
DOC: Added comment that the grafted output image should not be modified.
STYLE: Removed HoughTransform GetCircles parameter (n) which appears obsolete
ENH: Added deprecated GetCircles(unsigned int) overload to HoughTransform
COMP: Replaced deprecated GetCircles(n) call in HoughTransform example
BUG: HoughTransform CirclesList should be empty when NumberOfCircles is zero
ENH: Tested HoughTransform CirclesList is empty when NumberOfCircles is zero
BUG: HoughTransform GetCircles() should avoid circles with accumulator <= 0
STYLE: Removed HoughTransform GetLines parameter (n), which appears obsolete
ENH: Improved HoughTransform2DCirclesImageFilter accuracy, using Math::Round
BUG: HoughTransform GetLines() returned too many lines
PERF: Improved speed of HoughTransform2DCirclesImageFilter::GenerateData()
STYLE: HoughTransform calling convenience overload of SetVariance
DOC: Mentioned that HoughTransform2DCirclesImageFilter also finds discs
ENH: Allow different types accumulator and radius image Hough Circles filter
BUG: Access violation itkGaussianDerivativeOperatorTest argv[0]

Pablo Hernandez-Cerdan (4) phcerdan :
ENH: Add External Module IsotropicWavelets.
ENH: Update ExternalModule IsotropicWavelets to v0.4
ENH: Update IsotropicWavelets
COMP: Fix macro ITK_NOEXCEPT, deprecate ITK_NOEXCEPT_OR_THROW

Rene-Paul Debroize (1):
ENH: Add remote module TBBImageToImageFilter

Samuel Gerber (2):
ENH: Adding libLBFGS third party library
BUG: stdint.h missing on Visual Studio 9

Sean McBride (17) seanm :
COMP: Added missing ITK_OVERRIDE
COMP: fixed compilation error with int vs nullptr_t
PERF: Fixed some comments; prefer preincrement
COMP: Set GDCM_USE_COREFOUNDATION_LIBRARY off
COMP: add itk prefix to gdcmopenjp2 library name
COMP: Fixed some -Winconsistent-missing-override warnings
COMP: Added ITK_OVERRIDE to hundreds of destructor declarations.
COMP: Made ITK_OVERRIDE work only in MSVC >= 2012 (instead of 2010)
COMP: Fixed Wshadow warnings by removing shadows
COMP: Added a bunch more missing ITK_OVERRIDE
COMP: suppress all compilers warnings from third party google test
COMP: Added yet more ITK_OVERRIDEs, mostly on destructors
COMP: Added yet more ITK_OVERRIDEs
COMP: Fixed various -Wconst-qual warnings
COMP: Fixed some Wcast-qual warnings
COMP: Removed superfluous declarations in subclass, fixing override warnings
COMP: Silence -Wunused-template warnings by making affected methods inline

Simon Rit (1) simon.rit :
COMP: remove dynamic exception specifications

Steve Pieper (1) pieper :
BUG: ITK-3553 fixes ImageOrientation issue in DCMTK reader

Tobias Wood (3) spinicist :
ENH: Updated the Bruker2DSeq reader to ParaVision 6.0
BUG: Bruker2dseq was not registered correctly due to module name change.
BUG: Fixed origin & orientation issues.

VXL Maintainers (2):
VNL 2017-10-05 (dd7794d9)
VNL 2017-12-08 (a1573ca8)

Vladimir S. FONOV (2):
MINC 2017-09-14 (e11c6df9)
MINC 2017-10-18 (f2d06a67)

Ziv Yaniv (2) zivy :
DOC: Updated documentation for LabelStatisticsImageFilter::GetBoundingBox.
BUG: itkVTKImageIO::CanWriteFile accepted files with wrong extension.

ITK Sphinx Examples Changelog
-----------------------------------------------

Bradley Lowekamp (1) blowekamp :
Add python syntax highlighting

Dženan Zukić (1) dzenanz :
COMP: allow examples to build when ITK_LEGACY_REMOVE is enabled

Francois Budin (1) fbudin :
ENH: Bump ITK version to 4.13.0

Jon Haitz Legarreta Gorroño (6) jhlegarreta :
ENH: Add WatershedImageFilter example.
ENH: Improve layout and doc for adaptive histogram equalization example.
ENH: Update the ToDo list of examples to import from Wiki.
ENH: Add an example for itk::AdaptiveHistogramEqualizationImageFilter.
BUG: Fix the example images not being rendered.
DOC: Improve the README.rst code syntax.

Matt McCormick (2) matt.mccormick :
DOC: Update documentation to install PyPI package
STYLE: Make Python code in src/ flake8 compliant


ITK Software Guide Changelog
-----------------------------------------------

Francois Budin (1) fbudin :
ENH: Add patch number to ITK version in Software guide

Jon Haitz Legarreta Gorroño (21) jhlegarreta :
ENH: Make class and brief dcostring keywords' start columns consistent.
DOC: Update the ITK logo to the new ITK logo.
DOC: Fix `ParseCxxExamples.py` script location in `README.md`.
DOC: Fix use of \center vs. \centering in figures.
DOC: Update to the official name of Apple OS systems.
DOC: Remove redundant greater-than sign in path.
DOC: Keep ITK CMake minimum required version consistency.
DOC: Update the Advanced Module Configuration CMake options.
DOC: Update Figures 2.2 and 2.3 in Advanced Module Configuration.
DOC: Update supported compilers' list.
DOC: Transition SoftwareGuide/Cover and Latex READMEs to Markdown
DOC: Fix ITK long name case mismatch.
DOC: Fix Coding Style Guide formatting issues.
DOC: Add Documentation Style section.
DOC: Add a CMake Style item to the Overview section.
DOC: Mention the ITK full name in common abstract.
DOC: Add a cross compilation section to Configuring and Building ch.
DOC: Add content to empty example in Variable Initialization
DOC: Use tilde to connect names and references.
DOC: Enhance the `README.md` syntax.
DOC: Add a test layout subsection.

Matt McCormick (17) matt.mccormick :
DOC: Correct Coding Style Guide doxygen links
ENH: Enable specification of ITK_GIT_TAG in the superbuild
COMP: Use the xcolor package instead of color
ENH: Split Running and Parsing examples into an ExternalProject
ENH: Improve EPS conversion operation output
ENH: Add support for Ninja job pools
COMP: Address undefined colorlet command
COMP: Undefined toprule command
COMP: Undefined control sequence cellcolor
COMP: Undefined table configuration
BUG: Do not add_subdirectory(Examples) for ITKSoftwareGuide build
BUG: Do not depend on Examples generated .tex sources
BUG: Update ITK version to 2017-12-15 master
COMP: Remove ITKV3_COMPATIBILITY
ENH: Add CircleCI configuration
ENH: Propagate CMAKE_{C,CXX}_COMPILER_LAUNCHER in superbuild
ENH: Bump ITK version to 4.13.0

4.12.2

Edwin Bennink (1):
     BUG: Fixed cylinder bbox, fixed and enhanced IsInside func

Floris Berendsen (1):
     COMP: add symbol name mangling for niftilib in ITK

Jean-Christophe Fillion-Robin (2):
     COMP: Update MINC to set MACOSX_RPATH property based on CMAKE_MACOSX_RPATH
     COMP: Update KWsys to set MACOSX_RPATH property based on CMAKE_MACOSX_RPATH

Matthew McCormick (6):
     BUG: Correct GPUMeanImageFilter Superclass
     BUG: Remove debug code from GPUMeanImageFilter
     BUG: Do not use static_cast, SmartPointer in GPUImage::GetGPUDataManager
     BUG: Remove debug code in itkGPUImage.hxx
     COMP: Fix AnisotropicDiffusionLBR example build
     ENH: Bump CMakeLists.txt version to 4.12.2

Niels Dekker (1):
     COMP: Fixed <nifti1_io.h> leak into user code


ITK Software Guide changes:

Jon Haitz Legarreta Gorroño (8):
     DOC: Add and reference Coding Style appendix.
     DOC: Fix typo in Registration chapter files headers.
     STYLE: Replace tabs with white spaces.
     DOC: Fix typos in the SW guide LaTeX files.
     ENH: Add the link to the SW Guide PDF compilation version.
     DOC: Add missing wrap types to Wrapping section.
     STYLE: Rework the folder structure and rename files.
     ENH: Remove \ifitkFullVersion artifact switch.

Matt McCormick (2):
     DOC: Add instructions on how to install the stable Python packages
     ENH: Bump ITK ExternalProject version to 4.12.2

2.1.0

*SCIFIO*:

Dzenan Zukic (1):
COMP: fix direct inclusion of itkExceptionObject



*SimpleITKFilters*:

Bradley Lowekamp (4):
BUG: Removing comment out use of ITK test macro
ENH: Update CI to use Azure pipeline
BUG: Update to new ITK_ prefixed testing macros
Update README with Azure Pipeline badges



*SkullStrip*:

Jon Haitz Legarreta Gorroño (2):
ENH: Transition the example to the ITK testing framework.
BUG: Fix wrapping.

Matt McCormick (1):
BUG: Use ITK_TEMPLATE_EXPORT macro for StripTsImageFilter



*SplitComponents*:

Jon Haitz Legarreta Gorroño (1):
STYLE: Prefer = default to explicitly trivial implementations

Matt McCormick (1):
ENH: Bump ITK package dependency to 5.0.0.post1



*Strain*:

Jon Haitz Legarreta Gorroño (1):
STYLE: Add ITK prefix to testing macros

Matt McCormick (5):
ENH: Add Azure Pipelines configuration
DOC: Add Azure Pipelines badge
DOC: Add Python package installation
BUG: Do not wrap ImageToImageFilter scalar to covariant vector
ENH: Bump Python package version to 0.2.0



*SubdivisionQuadEdgeMeshFilter*:

Jon Haitz Legarreta Gorroño (1):
ENH: Add CI.



*TextureFeatures*:

Jon Haitz Legarreta Gorroño (1):
STYLE: Add ITK prefix to testing macros

Matt McCormick (2):
ENH: Update Python package for ITK 5.0.0.post1
COMP: Bump ITK C++ testing Git tag to 2019-06-21 master



*Thickness3D*:

Matt McCormick (2):
BUG: Prevent segfault in MedialThickness constructor (24)
ENH: Build Python package against ITK 5.0.0.post1 (25)

Thomas Janvier (3):
BUG: fix tests after PR24 (26)
REL: update version after tests validation (27)
Update README.rst



*TotalVariation*:

Dženan Zukić (1):
ENH: Build against ITK 5.0.0

Jon Haitz Legarreta Gorroño (1):
STYLE: Add ITK prefix to testing macros

Matt McCormick (5):
BUG: Require ITK 5.0.1 for the Python package build
BUG: Remove old Azure configuration
ENH: Update Azure configuration to use ITK 5.0.1
BUG: Run Window Python package build as administrator
Revert "BUG: Run Window Python package build as administrator"

Samuel Gerber (1):
FIX: Image Axes Change



*TwoProjectionRegistration*:

Dženan Zukić (1):
COMP: do not include "itkExceptionObject.h" directly

Matt McCormick (8):
ENH: Bump tests with Release CMAKE_BUILD_TYPE
ENH: Bump setup.py version to 1.0.1
ENH: Bump Azure ITK version for ITK 5.0.0
COMP: Add SiddonJacobRayCastInterpolateImageFunction for ITK 5
COMP: Remove GetMTime method
COMP: Use SpatialObject explicit IsInsideWorldSpace API for ITK 5
DOC: Add Python installation instructions
DOC: Fix Python package installation formatting

1.3.6

Bug Fixes

- ComputeTrainingMask preserve image info. TubeExtractor count. ([73253995](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/73253995))


Stephen R. Aylward (8):

Enhancements

- Replace incorrectly deleted MinimalPathExtractionExport.h (142) ([8de02fed](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/8de02fed))
- Bump to latest release of VTK and head of IPP (147) ([56ccb9ea](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/56ccb9ea))
- Remove dependencies on VTK and simplify build-test-deploy process (149) ([1dc871df](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/1dc871df))
- Update CI process to match ITK cookiecutter style, for better coverage of platforms (152) ([0b68ed12](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/0b68ed12))

Bug Fixes

- update wasm build scripts (146) ([414112ef](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/414112ef))
- Remove support for ARM/aarch64 and ENH: add support for caching CI VTK builds (144) ([14b57785](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/14b57785))
- Building tests fails on github workflow machines (153) ([454586b5](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/454586b5))

Miscellaneous Changes

- * ENH: Bump to latest release of VTK and disable IOSS compilation ([3ad175e0](https://github.com/InsightSoftwareConsortium/ITKTubeTK/commit/3ad175e0))


Ultrasound:
Dženan Zukić (12):

Enhancements

- Add wrapping for PhasedArray3DSpecialCoordinatesImage and filters ([8808f7a](https://github.com/KitwareMedical/ITKUltrasound/commit/8808f7a))
- Add Python tests for PhasedArray3DSpecialCoordinatesImage ([43179d3](https://github.com/KitwareMedical/ITKUltrasound/commit/43179d3))
- Bump version number to 0.6.2 ([6f6fc8f](https://github.com/KitwareMedical/ITKUltrasound/commit/6f6fc8f))
- Wrap IO factory for use from Python ([63fd45b](https://github.com/KitwareMedical/ITKUltrasound/commit/63fd45b))
- Add wrapping for itk::UltrasoundImageFileReader ([8bacc3d](https://github.com/KitwareMedical/ITKUltrasound/commit/8bacc3d))
- reorganize to ease removal of PhasedArray3DSpecialCoordinatesImage ([11b0ec8](https://github.com/KitwareMedical/ITKUltrasound/commit/11b0ec8))
- Add SSSCI wrapping with Python test and baseline ([637c0e7](https://github.com/KitwareMedical/ITKUltrasound/commit/637c0e7))
- Bump version number to 0.6.3 ([b351ac1](https://github.com/KitwareMedical/ITKUltrasound/commit/b351ac1))

Documentation Updates

- Correct itkCurvilinearArraySpecialCoordinatesImageFilters.wrap ([f5cc8f8](https://github.com/KitwareMedical/ITKUltrasound/commit/f5cc8f8))

Platform Fixes

- Fix warning C4834: discarding return value ([ce02933](https://github.com/KitwareMedical/ITKUltrasound/commit/ce02933))
- Fix warning C4834: discarding return value of function ([027b982](https://github.com/KitwareMedical/ITKUltrasound/commit/027b982))

Bug Fixes

- Fix a copy-paste bug in Python unit test ([6628586](https://github.com/KitwareMedical/ITKUltrasound/commit/6628586))


WebAssemblyInterface:

**Many**. Removed for size constraints.

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