Neurodamus

Latest version: v3.8.0

Safety actively analyzes 714792 Python packages for vulnerabilities to keep your Python projects secure.

Scan your dependencies

Page 2 of 13

3.4.0

=============
**21 June 2024**

*New Features*
* [BBPBGLIB-1152] Multi-cycle support for dry run estimate and instantiation (171)

*Improvements*
* Remove VecStim to use the version in neurodamus-models (177)
* Accurate synapse counts in dry-run (respect src target) (169)
* Optimize Dockerfile a bit (176)
* [BBPBGLIB-1141] Remove HDF5reader.mod which is already replaced by libsonata (162)

3.3.0

=============
**28 May 2024**

*New Features*
* [BBPBGLIB-1137] Account for nonzero total current when using SEClamp; allow nonzero total

*Bug Fixes*
* Fix record_spikes for load balancing (167)
* [BBPBGLIB-739] Override UTF-8 for logging (147)

*Improvements*
* Removing legacy RNGs, leaving only Random123 (136)
* [BBPBGLIB-1158] Add empirical mechanism to estimate simulation memory usage (165)
* Tests with subprocess should capture streams (164)
* Trigger workflow when pushing to main (172)
* Avoid calling cleanup from destructor (168)
* Add tests for python 3.9 to 3.12 (124)
* Cache dependent packages in GH actions workflow (166)

3.2.1

=============
**30 April 2024**

*New Features*
* [BBPBGLIB-1153] Allow disabling reports from SONATA config (159)

*Bug Fixes*
* Fix dead link from CONTRIBUTING.md to README.rst (160)
* Remove Report.hoc reference (158)

*Improvements*
* [BBPBGLIB-1154] Add information about CORENEURONLIB in the Docker README (161)

3.2.0

=============
**17 April 2024**

*Bug Fixes*
* [BBPBGLIB-1145] Write gids without offset in WholeCell LB complexity file (148)
* [BBPGBLIB-1147] Fixes crashes with KeyError when running sonataconf-sscx-O1 circuit on dry run (149)
* Hotfix to solve crashes when running on certain amount of ranks (141)

*Improvements*
* [BBPBGLIB-1057] Replace Report.hoc by report.py (145)
* [BBPGLIB-1148] Add support for gap junctions in dry run (151)
* Update online-lfp.rst (152)
* Update docker file with the new data location (153)
* Replay with SONATA spikes files (150)
* Clean up wheel contents. (144)
* [BBPBGLIB-1139] Missing exception logging on configuration errors (142)

3.1.1

=============
**12 Mar 2024**

*Bug Fixes*
* Fix fetching error in GH workflow triggered by tag

3.1.0

=============
**12 Mar 2024**

*New Features*
* [BBPBGLIB-1102] (Part two) Load memory balance from file (129)
* [BBPBGLIB-1102] Add memory load balance export based on dry run estimate (111)

*Bug Fixes*
* StrEnum not working with older python versions (125)
* Fix unit tests (119)

*Improvements*
* [BBPBGLIB-1125] GH forkflow for building a wheel (121)
* On --debug install a hook for NGV to show neuro-glial "spikes" (137)
* [BBPBGLIB-1132] Replace StimulusManager.hoc with the python classes (132)
* [BBPBGLIB-1134] Move ShowProgress.hoc to python (131)
* [BBPBGLIB-1135] Move CompartmentMapping to python (133)
* [BBPBGLIB-1133] Remove ElectrodeManager.hoc and LookupTableV2.mod (128)
* [BBPBGLIB-1121] Remove BlueConfig parser (127)
* Use actions/checkoutv4 to use Node 20 (126)
* [BBPBGLIB-1127] Remove SpikeWriter.mod and out.dat (123)
* [BBPBGLIB-1110] Error now raised when executeConfigure is returned with errors (120)
* Remove SynapseReader.mod and SynReaderNRN (122)
* [BBPBGLIB-1124] Remove hoc targets related code (118)
* [BBPBGLIB-1120] Remove node loaders for MVD3 and NCS (117)

Page 2 of 13

© 2025 Safety CLI Cybersecurity Inc. All Rights Reserved.