Pyfaidx

Latest version: v0.8.1.3

Safety actively analyzes 688007 Python packages for vulnerabilities to keep your Python projects secure.

Scan your dependencies

Page 2 of 13

0.7.2.1

What's Changed
* missing setuptools dependency in v0.7.2 by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/207


**Full Changelog**: https://github.com/mdshw5/pyfaidx/compare/v0.7.2...v0.7.2.1

0.7.2

What's Changed
* Add use case for indexing FASTA with suppressed output by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/198
* Update python versions in CI by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/197
* fix bgzf test failure with biopython 1.80 by emollier in https://github.com/mdshw5/pyfaidx/pull/199
* Switch to pyproject.toml by marcelm in https://github.com/mdshw5/pyfaidx/pull/200
* fix ResourceWarning: unclosed file by siebrenf in https://github.com/mdshw5/pyfaidx/pull/202
* Move the --invert-match example to the top by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/204
* 'Sequence.gc' Method for IUPAC bases by Bardia-Masudy in https://github.com/mdshw5/pyfaidx/pull/205

New Contributors
* emollier made their first contribution in https://github.com/mdshw5/pyfaidx/pull/199
* siebrenf made their first contribution in https://github.com/mdshw5/pyfaidx/pull/202
* Bardia-Masudy made their first contribution in https://github.com/mdshw5/pyfaidx/pull/205

**Full Changelog**: https://github.com/mdshw5/pyfaidx/compare/v0.7.1...v0.7.2

0.7.1

What's Changed
* pathlib.Path can be passed to Fasta and Faidx by palao in https://github.com/mdshw5/pyfaidx/pull/184
* Bump minimum python to 3.7 by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/195
* fix: remove seemingly superfluous import of pysam by johanneskoester in https://github.com/mdshw5/pyfaidx/pull/194
* Merge changes from 184 to release by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/196

New Contributors
* palao made their first contribution in https://github.com/mdshw5/pyfaidx/pull/184
* johanneskoester made their first contribution in https://github.com/mdshw5/pyfaidx/pull/194

**Full Changelog**: https://github.com/mdshw5/pyfaidx/compare/v0.7.0...v0.7.1

0.7.0

What's Changed
* Add acidbio/bed tests by mdshw5 in https://github.com/mdshw5/pyfaidx/pull/188
* Minor change in pytest xfail usage in tests by ap-- in https://github.com/mdshw5/pyfaidx/pull/191
* Add fsspec support by ap-- in https://github.com/mdshw5/pyfaidx/pull/190
* Implement fsspec handling for indexname by ap-- in https://github.com/mdshw5/pyfaidx/pull/193

New Contributors
* ap-- made their first contribution in https://github.com/mdshw5/pyfaidx/pull/191

**Full Changelog**: https://github.com/mdshw5/pyfaidx/compare/v0.6.4...v0.7.0

0.6.4

- Migrated test suite from nose to pytest
- Removed some deprecated function calls (185)
- Added support for `pathlib.Path` (184)

0.6.3.1

- Removes large test data accidentally added in last release

Page 2 of 13

© 2024 Safety CLI Cybersecurity Inc. All Rights Reserved.