Pyfaidx

Latest version: v0.8.1.3

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0.5.9.1

- Refactored FAI writing to account for system locale setting (166) folded

0.5.9

- more efficient iterator method for `Fasta` objects in 163 (thanks C-nit)

0.5.8

- Implemented `Fasta.__len__` (157)
- `Sequence` instances can now be compared against strings (158 thanks Maarten-vd-Sande)

0.5.7

- `Fasta` instances now have dictionary methods: `Fasta.keys` returns sequence names, `Fasta.values` returns `FastaRecord` instances, and `Fasta.items` returns a tuple of (key, value) pairs. 156 (thanks Maarten-vd-Sande)

0.5.6

- Support for returning zero-length sequences (155 and 93 see example below) (thanks prihoda!)


>>> from pyfaidx import Fasta
>>> fasta = Fasta('data/genes.fasta', strict_bounds=True)
>>> len(fasta['gi|557361099|gb|KF435150.1|'][100:100] == 0
True

0.5.5.2

- minor bug fix release adding support for python 3.7 (145)

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