- Added `build_index` argument for `Faidx` and `Fasta` (134) - Raise `IndexNotFoundError` and `FastaNotFoundError` instead of `IOError` when files aren't readable (134)
0.5.2
- Fixes an issue with `faidx --transform bed` which used [1, 1] coordinates and now uses (0, 1] coordinates as specified by BED
0.5.1
- Spliced sequence retrieval 127 (Thanks simonvh)
0.5.0.1
- Removed BGZF warning (123) since the test suite contains good coverage of this feature.
0.5.0
- coordinates with start > end can be auto reverse complemented using `--auto-strand` argument (120) - `--no-coords` flag in `faidx` script suppresses "sequence:start-end" in output sequence headers (121) - `Sequence.long_name` is deprecated in favor of `Sequence.fancy_name`. `Sequence.longname()` is now removed from the codebase after previous DeprecationWarnings.