Scarf

Latest version: v0.31.1

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0.8.0

CHANGELOG:

**New features**

Pytest based testing
Added circleCI based continuous integration of tests

**Improvements**

Improved Docstrings (thanks to razofz)
Added support for grid plotting (thanks to JohanRodhe)
Fixed issues with wget causing verbose output in vignettes

0.7.8

CHANGELOG:

Improvements

`DataStore.make_subset()` was removed and its functionality ported to`writers.ZarrSubset`
`OSFdownloader` was updated to play well with Figshare account and show data sources

0.7.7

CHANGELOG:

New versions of Dask (2021.04.0 upwards) have some issues that cause memory spikes in Scarf.
Hence, the requirement has been pinned to <=2021.03.01
The issue is being tracked here: https://github.com/dask/dask/issues/7583

0.7.6

CHANGELOG:

Fixed bugs in DataStore.make_graph() and AnnStream related to external/custom transformers

0.7.5

CHANGELOG:


**Improvements**

DataStore.make_subset() and ZarrMerge() now support transfering filtering information.
Improved make_subset to prevent overwriting files
AnnStream now supports disabling dimension reduction
Fixed cropping of legends in plot_scatter()

**New features**

Added option to add external data reduction transformers. in DataStore.make_graph()
Added option in DataStore.make_graph() to plot elbow_plots of % variance explained by each component.

0.7.4

CHANGELOG:

**New features**

`export_markers_to_csv` in DataStore enables exporting marker tables

**Improvements**

Improved Docstrings (thanks to razofz)
Improved vignettes (thanks to JohanRodhe)
Removed stale shared libs for sgtsne.
Added `reset_previous` parameter to `filter_cells` in `DataStore`
Added `reset_cell_filter` parameter to ZarrMerge. All cell attributes are now copied into merged Zarr file

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