- Fixed a few trivial bugs, and increased the version number to 2.0.
1.89
- Adsorption, desorption, and partial transmission algorithms now work well and have been verified to be accurate. Also added molecules with excluded volume. Lots of new code structure improvements will enable several planned features (including macromolecular complexes and a command line user input).
1.88
- First release of SmolCrowd utility program, adsorption, desorption and partial transmission should be correct but have not been verified, improved integer-time commands, and simplified the configuration file format slightly.
1.87
- Vastly improved the wrl2smol utility program.
1.86
- Fixed several minor bugs, improved makefiles for more reliable installation, and made Smoldyn compatible with 64-bit machines.
1.85
- The Mersenne Twister is now used for random numbers, added define statements to parser, renamed allosteric reactions to conformational spread reactions, and fixed lots of minor bugs and one significant one (reaction products ended up across surfaces).