Binchicken

Latest version: v0.12.6

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0.11.0

What's Changed
* fix binchicken suffix trimming by AroneyS in https://github.com/AroneyS/binchicken/pull/118
* Fix nontargets evaluation by AroneyS in https://github.com/AroneyS/binchicken/pull/119
* Error updates by AroneyS in https://github.com/AroneyS/binchicken/pull/120
* Update SingleM to v0.18 by AroneyS in https://github.com/AroneyS/binchicken/pull/123
* Remove GTDBtk from Aviary fast by AroneyS in https://github.com/AroneyS/binchicken/pull/122


**Full Changelog**: https://github.com/AroneyS/binchicken/compare/v0.10.5...v0.11.0

0.10.5

What's Changed
* Update dependencies by AroneyS in https://github.com/AroneyS/binchicken/pull/111
* Fix filter bam naming bug by AroneyS in https://github.com/AroneyS/binchicken/pull/112 (Thanks Andy Leu)
* Fix tmpdir by AroneyS in https://github.com/AroneyS/binchicken/pull/114
* Harden evaluate by AroneyS in https://github.com/AroneyS/binchicken/pull/116
* Add coverage to evaluate by AroneyS in https://github.com/AroneyS/binchicken/pull/117
* Update Aviary by AroneyS in https://github.com/AroneyS/binchicken/pull/115


**Full Changelog**: https://github.com/AroneyS/binchicken/compare/v0.10.4...v0.10.5

0.10.4

What's Changed
* Add doctave-based docs by AroneyS in https://github.com/AroneyS/binchicken/pull/101
* bin: Improve help msgs. by wwood in https://github.com/AroneyS/binchicken/pull/102
* Improve snakemake retry behaviour by AroneyS in https://github.com/AroneyS/binchicken/pull/105
* Reduce `update` required inputs by AroneyS in https://github.com/AroneyS/binchicken/pull/106
* fix COASSEMBLY_SAMPLES causing lengths to get out of sync by AroneyS in https://github.com/AroneyS/binchicken/pull/107
* Improve Aviary running by AroneyS in https://github.com/AroneyS/binchicken/pull/108
* Notify if any sample skipped by AroneyS in https://github.com/AroneyS/binchicken/pull/109
* Update improvements by AroneyS in https://github.com/AroneyS/binchicken/pull/110

New Contributors
* wwood made their first contribution in https://github.com/AroneyS/binchicken/pull/102

**Full Changelog**: https://github.com/AroneyS/binchicken/compare/v0.10.3...v0.10.4

0.10.3

What's Changed
* Add links and citation by AroneyS in https://github.com/AroneyS/binchicken/pull/100


**Full Changelog**: https://github.com/AroneyS/binchicken/compare/v0.10.2...v0.10.3

0.10.2

Fix pypi upload

0.10.1

- New release for Zenodo
- Increase memory for rules with retries

**Full Changelog**: https://github.com/AroneyS/binchicken/compare/v0.10.0...v0.10.1

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